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Aliases for MIR210HG Gene

Subcategory (RNA class) for MIR210HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR210HG Gene

  • MIR210 Host Gene 2 3 5
  • MIR210 Host Gene (Non-Protein Coding) 2

External Ids for MIR210HG Gene

Previous GeneCards Identifiers for MIR210HG Gene

  • GC11M000567
  • GC11M000571
  • GC11M000574
  • GC11M000577
  • GC11M000580
  • GC11M000579
  • GC11M000583
  • GC11M000586
  • GC11M000590

Summaries for MIR210HG Gene

GeneCards Summary for MIR210HG Gene

MIR210HG (MIR210 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR210HG Gene

Genomics for MIR210HG Gene

Regulatory Elements for MIR210HG Gene

Enhancers for MIR210HG Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F000566 1 ENCODE 0.8 0.0 -9 3.3 ATF1 CREB3L1 ARID4B SIN3A ZNF48 SLC30A9 GLIS2 ZNF143 FOS PAF1 HRAS TMEM80 LRRC56 PHRF1 ENSG00000270105 GC11M000572 GC11M000576 MIR210HG
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR210HG on UCSC Golden Path with GeneCards custom track

Promoters for MIR210HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000556858 57 2401 ATF1 CREB3L1 ARID4B SIN3A ZNF48 SLC30A9 GLIS2 ZNF143 FOS PAF1

Genomic Location for MIR210HG Gene

Chromosome:
11
Start:
565,657 bp from pter
End:
568,457 bp from pter
Size:
2,801 bases
Orientation:
Minus strand

Genomic View for MIR210HG Gene

Genes around MIR210HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR210HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR210HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR210HG Gene

Proteins for MIR210HG Gene

Post-translational modifications for MIR210HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR210HG Gene

Domains & Families for MIR210HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR210HG Gene

Function for MIR210HG Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR210HG Gene

Localization for MIR210HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR210HG Gene

Pathways & Interactions for MIR210HG Gene

SuperPathways for MIR210HG Gene

No Data Available

Interacting Proteins for MIR210HG Gene

Gene Ontology (GO) - Biological Process for MIR210HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR210HG Gene

Transcripts for MIR210HG Gene

mRNA/cDNA for MIR210HG Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MIR210HG Gene

MIR210 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR210HG Gene

No ASD Table

Relevant External Links for MIR210HG Gene

GeneLoc Exon Structure for
MIR210HG
ECgene alternative splicing isoforms for
MIR210HG

Expression for MIR210HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR210HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR210HG Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.2), Esophagus - Mucosa (x4.0), and Skin - Not Sun Exposed (Suprapubic) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of MIR210HG Gene:

MIR210HG

SOURCE GeneReport for Unigene cluster for MIR210HG Gene:

Hs.446388
genes like me logo Genes that share expression patterns with MIR210HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR210HG Gene

Orthologs for MIR210HG Gene

Evolution for MIR210HG Gene

ENSEMBL:
Gene Tree for MIR210HG (if available)
TreeFam:
Gene Tree for MIR210HG (if available)

No data available for Orthologs for MIR210HG Gene

Paralogs for MIR210HG Gene

No data available for Paralogs for MIR210HG Gene

Variants for MIR210HG Gene

Sequence variations from dbSNP and Humsavar for MIR210HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1056812 -- 565,840(-) CCAGA(A/G)AAAGG nc-transcript-variant
rs1062099 -- 567,627(+) AGAAG(C/G)CAGGC nc-transcript-variant, downstream-variant-500B
rs10902173 -- 570,072(+) ATCTG(C/T)AGTGA upstream-variant-2KB
rs111264521 -- 566,366(+) CCTCC(C/T)GGAGG nc-transcript-variant
rs111469444 -- 566,503(+) AGGTG(A/C/G)CCGTC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR210HG Gene

Variant ID Type Subtype PubMed ID
dgv1522n54 CNV loss 21841781
dgv1523n54 CNV gain 21841781
dgv182e199 CNV deletion 23128226
dgv564n106 OTHER inversion 24896259
esv2759794 CNV loss 17122850
nsv1039558 CNV gain 25217958
nsv1053964 CNV gain 25217958
nsv1069991 CNV deletion 25765185
nsv1077764 OTHER inversion 25765185
nsv1126280 CNV deletion 24896259
nsv1136121 CNV deletion 24896259
nsv1159791 CNV deletion 26073780
nsv467634 CNV loss 19166990
nsv467635 CNV loss 19166990
nsv469923 CNV loss 18288195
nsv469924 CNV gain 18288195
nsv518824 CNV loss 19592680
nsv527327 CNV loss 19592680
nsv528415 CNV loss 19592680
nsv552854 CNV loss 21841781
nsv552856 CNV gain 21841781
nsv951270 CNV deletion 24416366

Relevant External Links for MIR210HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR210HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR210HG Gene

Disorders for MIR210HG Gene

Relevant External Links for MIR210HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR210HG

No disorders were found for MIR210HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR210HG Gene

Publications for MIR210HG Gene

  1. CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells. (PMID: 27980086) Liu S.J. … Lim D.A. (Science 2016) 2 3 64
  2. The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury. (PMID: 26400545) Lin J. … Reilly M.P. (Am. J. Physiol. Renal Physiol. 2015) 2 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for MIR210HG Gene

Sources for MIR210HG Gene

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