Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR210HG Gene

Subcategory (RNA class) for MIR210HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR210HG Gene

  • MIR210 Host Gene 2 3 5
  • MIR210 Host Gene (Non-Protein Coding) 2

External Ids for MIR210HG Gene

Previous GeneCards Identifiers for MIR210HG Gene

  • GC11M000567
  • GC11M000571
  • GC11M000574
  • GC11M000577
  • GC11M000580
  • GC11M000579
  • GC11M000583
  • GC11M000586
  • GC11M000590
  • GC11M000592
  • GC11M000594
  • GC11M000596

Summaries for MIR210HG Gene

GeneCards Summary for MIR210HG Gene

MIR210HG (MIR210 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR210HG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR210HG Gene

Genomics for MIR210HG Gene

GeneHancer (GH) Regulatory Elements for MIR210HG Gene

Promoters and enhancers for MIR210HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I000566 Promoter/Enhancer 1.4 Ensembl ENCODE 550.8 0.0 -9 3.2 ATF1 ARNT ARID4B SIN3A ZNF48 SLC30A9 GLIS2 ZNF143 FOS ATF7 GC11M000569 GC11M000572 GC11M000576 MIR210 MIR210HG HRAS TMEM80 LRRC56 PHRF1 ENSG00000270105
GH11I000559 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 +5.5 5542 7.5 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 POLR2B FOS LMNTD2 GC11M000563 RASSF7 PHRF1 HRAS TMEM80 PKP3 RNH1 PTDSS2 GC11M000576
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR210HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR210HG Gene

Genomic Locations for MIR210HG Gene
chr11:565,657-568,457
(GRCh38/hg38)
Size:
2,801 bases
Orientation:
Minus strand
chr11:565,657-568,457
(GRCh37/hg19)

Genomic View for MIR210HG Gene

Genes around MIR210HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR210HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR210HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR210HG Gene

Proteins for MIR210HG Gene

Post-translational modifications for MIR210HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR210HG Gene

Domains & Families for MIR210HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR210HG Gene

Function for MIR210HG Gene

Phenotypes From GWAS Catalog for MIR210HG Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR210HG Gene

Localization for MIR210HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR210HG Gene

Pathways & Interactions for MIR210HG Gene

SuperPathways for MIR210HG Gene

No Data Available

Interacting Proteins for MIR210HG Gene

Gene Ontology (GO) - Biological Process for MIR210HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR210HG Gene

Drugs & Compounds for MIR210HG Gene

No Compound Related Data Available

Transcripts for MIR210HG Gene

mRNA/cDNA for MIR210HG Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MIR210HG Gene

MIR210 host gene (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR210HG Gene

No ASD Table

Relevant External Links for MIR210HG Gene

GeneLoc Exon Structure for
MIR210HG
ECgene alternative splicing isoforms for
MIR210HG

Expression for MIR210HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR210HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR210HG Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.2), Esophagus - Mucosa (x4.0), and Skin - Not Sun Exposed (Suprapubic) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of MIR210HG Gene:

MIR210HG

SOURCE GeneReport for Unigene cluster for MIR210HG Gene:

Hs.446388
genes like me logo Genes that share expression patterns with MIR210HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR210HG Gene

Orthologs for MIR210HG Gene

Evolution for MIR210HG Gene

ENSEMBL:
Gene Tree for MIR210HG (if available)
TreeFam:
Gene Tree for MIR210HG (if available)

No data available for Orthologs for MIR210HG Gene

Paralogs for MIR210HG Gene

No data available for Paralogs for MIR210HG Gene

Variants for MIR210HG Gene

Sequence variations from dbSNP and Humsavar for MIR210HG Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000153320 -- 566,144(-) G/T non_coding_transcript_variant
rs1000345272 -- 568,111(-) A/G intron_variant
rs1001395914 -- 566,835(-) A/G non_coding_transcript_variant
rs1001884103 -- 569,981(-) G/A upstream_transcript_variant
rs1002184750 -- 567,631(-) G/A non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR210HG Gene

Variant ID Type Subtype PubMed ID
dgv1522n54 CNV loss 21841781
dgv1523n54 CNV gain 21841781
dgv182e199 CNV deletion 23128226
dgv564n106 OTHER inversion 24896259
esv2759794 CNV loss 17122850
nsv1039558 CNV gain 25217958
nsv1053964 CNV gain 25217958
nsv1069991 CNV deletion 25765185
nsv1077764 OTHER inversion 25765185
nsv1126280 CNV deletion 24896259
nsv1136121 CNV deletion 24896259
nsv1159791 CNV deletion 26073780
nsv467634 CNV loss 19166990
nsv467635 CNV loss 19166990
nsv469923 CNV loss 18288195
nsv469924 CNV gain 18288195
nsv518824 CNV loss 19592680
nsv527327 CNV loss 19592680
nsv528415 CNV loss 19592680
nsv552854 CNV loss 21841781
nsv552856 CNV gain 21841781
nsv951270 CNV deletion 24416366

Additional Variant Information for MIR210HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR210HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR210HG Gene

Disorders for MIR210HG Gene

Additional Disease Information for MIR210HG

No disorders were found for MIR210HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR210HG Gene

Publications for MIR210HG Gene

  1. CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells. (PMID: 27980086) Liu SJ … Lim DA (Science (New York, N.Y.) 2017) 2 3 58
  2. Long Noncoding RNA miR210HG as a Potential Biomarker for the Diagnosis of Glioma. (PMID: 27673330) Min W … Yue Z (PloS one 2016) 2 3 58
  3. The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury. (PMID: 26400545) Lin J … Reilly MP (American journal of physiology. Renal physiology 2015) 2 3 58
  4. Long Noncoding RNA miR210HG Sponges miR-503 to Facilitate Osteosarcoma Cell Invasion and Metastasis. (PMID: 28972855) Li J … Zhang CQ (DNA and cell biology 2017) 3 58
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for MIR210HG Gene

Sources for MIR210HG Gene

Content
Loading form....