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Aliases for MIR2054 Gene

Subcategory (RNA class) for MIR2054 Gene

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Quality Score for this RNA gene is

2

Aliases for MIR2054 Gene

  • MicroRNA 2054 2 3
  • Hsa-Mir-2054 3

External Ids for MIR2054 Gene

ORGUL Members for MIR2054 Gene

Previous GeneCards Identifiers for MIR2054 Gene

  • GC00U923223
  • GC04P126428

Summaries for MIR2054 Gene

Entrez Gene Summary for MIR2054 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR2054 Gene

MIR2054 (MicroRNA 2054) is an RNA Gene, and is affiliated with the undefined RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR2054 Gene

Genomics for MIR2054 Gene

Genomic Location for MIR2054 Gene

Chromosome:
4
Start:
125,507,259 bp from pter
End:
125,507,307 bp from pter
Size:
49 bases
Orientation:
Plus strand

Genomic View for MIR2054 Gene

Genes around MIR2054 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR2054 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR2054 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR2054 Gene

No data available for Regulatory Elements for MIR2054 Gene

Proteins for MIR2054 Gene

Post-translational modifications for MIR2054 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR2054 Gene

Domains & Families for MIR2054 Gene

Gene Families for MIR2054 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR2054: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR2054 Gene

Function for MIR2054 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR2054 Gene

Localization for MIR2054 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR2054 Gene

Pathways & Interactions for MIR2054 Gene

SuperPathways for MIR2054 Gene

No Data Available

Interacting Proteins for MIR2054 Gene

Gene Ontology (GO) - Biological Process for MIR2054 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR2054 Gene

Drugs & Compounds for MIR2054 Gene

No Compound Related Data Available

Transcripts for MIR2054 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MIR2054 Gene

No ASD Table

Relevant External Links for MIR2054 Gene

GeneLoc Exon Structure for
MIR2054
ECgene alternative splicing isoforms for
MIR2054

No data available for mRNA/cDNA for MIR2054 Gene

Expression for MIR2054 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR2054 Gene

Orthologs for MIR2054 Gene

No data available for Orthologs and Evolution for MIR2054 Gene

Paralogs for MIR2054 Gene

No data available for Paralogs for MIR2054 Gene

Variants for MIR2054 Gene

Sequence variations from dbSNP and Humsavar for MIR2054 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1395225 -- 125,507,741(-) AAATT(A/T)TATTT downstream-variant-500B
rs34459525 -- 125,505,640(+) CGAAG(-/T)ATTTA upstream-variant-2KB
rs75549227 -- 125,505,636(+) AGAGA(C/T)GAAGA upstream-variant-2KB
rs72677711 -- 125,506,965(+) AGATG(C/T)TTTGT upstream-variant-2KB
rs78099441 -- 125,506,107(+) AAATA(A/C)ACTTA upstream-variant-2KB

Relevant External Links for MIR2054 Gene

HapMap Linkage Disequilibrium report
MIR2054

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR2054 Gene

Disorders for MIR2054 Gene

Relevant External Links for MIR2054

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR2054

No disorders were found for MIR2054 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR2054 Gene

Publications for MIR2054 Gene

  1. A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB. (PMID: 19734545) Need A.C. … Goldstein D.B. (Hum. Mol. Genet. 2009) 3 67
  2. Prediction of human miRNAs using tissue-selective motifs in 3' UTRs. (PMID: 18952845) Chang Y.M. … Shih A.C. (Proc. Natl. Acad. Sci. U.S.A. 2008) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR2054 Gene

Sources for MIR2054 Gene

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