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Aliases for MIR2053 Gene

Subcategory (RNA class) for MIR2053 Gene


Quality Score for this RNA gene is


Aliases for MIR2053 Gene

  • MicroRNA 2053 2 3 5
  • Hsa-Mir-2053 3

External Ids for MIR2053 Gene

ORGUL Members for MIR2053 Gene

Previous GeneCards Identifiers for MIR2053 Gene

  • GC00U923212
  • GC08P113655

Summaries for MIR2053 Gene

Entrez Gene Summary for MIR2053 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR2053 Gene

MIR2053 (MicroRNA 2053) is an RNA Gene, and is affiliated with the undefined RNA class.

Additional gene information for MIR2053 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR2053 Gene

Genomics for MIR2053 Gene

GeneHancer (GH) Regulatory Elements for MIR2053 Gene

Promoters and enhancers for MIR2053 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I112673 Enhancer 0.6 Ensembl ENCODE 11.3 +30.6 30648 2 MAFF MAFK MIR2053 GC08P112947 CSMD3
GH08I112881 Enhancer 0.5 ENCODE 0.1 +238.8 238764 1.2 MAX POU5F1 BACH1 NFE2 GC08P112947 MIR2053 CSMD3
GH08I112806 Enhancer 0.4 ENCODE 0.1 +163.3 163270 0.7 CTCF SMC3 RAD21 CSMD3 GC08P112947 MIR2053
GH08I112809 Enhancer 0.4 ENCODE 0.1 +166.6 166566 0.3 SP1 POLR2A GC08P112947 MIR2053 CSMD3
GH08I112887 Enhancer 0.4 ENCODE 0.1 +244.9 244908 2 FOXP2 TCF7L2 GC08P112947 MIR2053 CSMD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR2053 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR2053 Gene

Genomic Locations for MIR2053 Gene
91 bases
Plus strand

Genomic View for MIR2053 Gene

Genes around MIR2053 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR2053 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR2053 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR2053 Gene

Proteins for MIR2053 Gene

Post-translational modifications for MIR2053 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR2053 Gene

Domains & Families for MIR2053 Gene

Gene Families for MIR2053 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR2053: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR2053 Gene

Function for MIR2053 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR2053 Gene

Localization for MIR2053 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR2053 Gene

Pathways & Interactions for MIR2053 Gene

SuperPathways for MIR2053 Gene

No Data Available

Interacting Proteins for MIR2053 Gene

Gene Ontology (GO) - Biological Process for MIR2053 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR2053 Gene

Drugs & Compounds for MIR2053 Gene

No Compound Related Data Available

Transcripts for MIR2053 Gene

mRNA/cDNA for MIR2053 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR2053 Gene

No ASD Table

Relevant External Links for MIR2053 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR2053 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR2053 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR2053 Gene

Orthologs for MIR2053 Gene

Evolution for MIR2053 Gene

Gene Tree for MIR2053 (if available)
Gene Tree for MIR2053 (if available)

No data available for Orthologs for MIR2053 Gene

Paralogs for MIR2053 Gene

No data available for Paralogs for MIR2053 Gene

Variants for MIR2053 Gene

Sequence variations from dbSNP and Humsavar for MIR2053 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1001118315 -- 112,643,019(+) T/C upstream_transcript_variant
rs1001482128 -- 112,641,920(+) G/A upstream_transcript_variant
rs1002710461 -- 112,643,787(+) G/A downstream_transcript_variant
rs1005637740 -- 112,642,157(+) C/T upstream_transcript_variant
rs1006375636 -- 112,643,997(+) T/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR2053 Gene

Variant ID Type Subtype PubMed ID
nsv831427 CNV loss 17160897

Additional Variant Information for MIR2053 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR2053 Gene

Disorders for MIR2053 Gene

Additional Disease Information for MIR2053

No disorders were found for MIR2053 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR2053 Gene

Publications for MIR2053 Gene

  1. Prediction of human miRNAs using tissue-selective motifs in 3' UTRs. (PMID: 18952845) Chang YM … Shih AC (Proceedings of the National Academy of Sciences of the United States of America 2008) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR2053 Gene

Sources for MIR2053 Gene

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