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Aliases for MIR1972-1 Gene

Subcategory (RNA class) for MIR1972-1 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1972-1 Gene

  • MicroRNA 1972-1 2 3
  • MicroRNA 1972 2 3
  • Hsa-Mir-1972-1 3
  • Hsa-Mir-1972 3
  • MIR1972 3

External Ids for MIR1972-1 Gene

Previous HGNC Symbols for MIR1972-1 Gene

  • MIR1972

Previous GeneCards Identifiers for MIR1972-1 Gene

  • GC10M075629
  • GC16M015109

Summaries for MIR1972-1 Gene

Entrez Gene Summary for MIR1972-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1972-1 Gene

MIR1972-1 (MicroRNA 1972-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1972-1 Gene

Genomics for MIR1972-1 Gene

Genomic Location for MIR1972-1 Gene

Start:
15,010,321 bp from pter
End:
15,010,397 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR1972-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR1972-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1972-1 Gene

No data available for Regulatory Elements for MIR1972-1 Gene

Proteins for MIR1972-1 Gene

Post-translational modifications for MIR1972-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1972-1 Gene

Domains for MIR1972-1 Gene

Gene Families for MIR1972-1 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1972-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1972-1 Gene

Function for MIR1972-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR1972-1 Gene

Localization for MIR1972-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1972-1 Gene

Pathways for MIR1972-1 Gene

SuperPathways for MIR1972-1 Gene

No Data Available

Interacting Proteins for MIR1972-1 Gene

Gene Ontology (GO) - Biological Process for MIR1972-1 Gene

None

No data available for Pathways by source for MIR1972-1 Gene

Transcripts for MIR1972-1 Gene

mRNA/cDNA for MIR1972-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR1972-1
    • Block miRNA regulation of MIR1972-1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR1972-1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for MIR1972-1 Gene

    No ASD Table

    Relevant External Links for MIR1972-1 Gene

    GeneLoc Exon Structure for
    MIR1972-1
    ECgene alternative splicing isoforms for
    MIR1972-1

    Expression for MIR1972-1 Gene

    mRNA expression in normal human tissues for MIR1972-1 Gene

    genes like me logo Genes that share expressions with MIR1972-1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR1972-1 Gene

    Orthologs for MIR1972-1 Gene

    Evolution for MIR1972-1 Gene

    ENSEMBL:
    Gene Tree for MIR1972-1 (if available)
    TreeFam:
    Gene Tree for MIR1972-1 (if available)

    No data available for Orthologs for MIR1972-1 Gene

    Paralogs for MIR1972-1 Gene

    No data available for Paralogs for MIR1972-1 Gene

    Variants for MIR1972-1 Gene

    Structural Variations from Database of Genomic Variants (DGV) for MIR1972-1 Gene

    Variant ID Type Subtype PubMed ID
    dgv895e1 CNV Complex 17122850
    nsv1853 CNV Loss 18451855
    dgv2892n71 CNV Gain 21882294
    dgv2893n71 CNV Gain 21882294
    dgv485n67 CNV Loss 20364138
    esv2714669 CNV Deletion 23290073
    nsv428328 CNV Gain+Loss 18775914
    dgv2894n71 CNV Gain 21882294
    dgv2895n71 CNV Loss 21882294
    nsv436059 CNV Insertion 17901297
    esv2657437 CNV Deletion 23128226
    dgv2896n71 CNV Gain 21882294
    dgv2897n71 CNV Gain 21882294
    nsv827719 CNV Gain 20364138
    nsv833269 CNV Loss 17160897
    esv987821 CNV Gain 20482838
    esv25951 CNV Loss 19812545
    nsv9453 CNV Loss 18304495
    nsv827721 CNV Loss 20364138
    nsv827722 CNV Loss 20364138
    nsv827723 CNV Loss 20364138
    nsv906845 CNV Gain 21882294
    nsv820087 CNV Loss 19587683
    essv1325 CNV CNV 17122850
    nsv517743 CNV Loss 19592680

    Relevant External Links for MIR1972-1 Gene

    HapMap Linkage Disequilibrium report
    MIR1972-1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR1972-1 Gene

    Disorders for MIR1972-1 Gene

    No disorders were found for MIR1972-1 Gene.

    No data available for UniProtKB/Swiss-Prot for MIR1972-1 Gene

    Publications for MIR1972-1 Gene

    1. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander E.S. … Szustakowki J. (Nature 2001) 3
    2. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) (Nature 2004) 3
    3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3
    4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
    5. Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia. (PMID: 18923441) Schotte D. … den Boer M.L. (Leukemia 2009) 3

    Products for MIR1972-1 Gene

    Sources for MIR1972-1 Gene

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