Aliases
for MIR193A gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
10fRNAdb,
12H-InvDB,
13NCBI,
14NONCODE,
and/or 15RNAdb)
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Subcategory (RNA class): miRNA
Quality score for this RNA gene is 3
| Aliases |
|---|
| MicroRNA 193a1 2 | | MIRN1931 2 | | MIRN193A1 2 | | MicroRNA 1931 | | mir-193a9 |
| External Ids: | HGNC: 315631 | Entrez Gene: 4069682 | Ensembl: ENSG000002076147 | OMIM: 6147335 |
Export aliases for MIR193A gene to outside databasesPrevious GC identifer: GC17P026914
|---|
Summaries
for MIR193A gene(According to Entrez Gene,
GeneCards,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
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Entrez Gene summary for MIR193A Gene:
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of
gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are
transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can
be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme
to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the
cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The
mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through
imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of
the target mRNA. The RefSeq represents the predicted microRNA stem-loop. (provided by RefSeq, Sep 2009)
GeneCards Summary for MIR193A Gene:
MIR193A (microRNA 193a) is an RNA gene, and is affiliated with the miRNA class. Diseases associated with MIR193A include acute myeloid leukemia, and endometrial adenocarcinoma.
|
Genomic Views
for MIR193A gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 75),
Regulatory elements and Epigenetics data according to
QIAGEN, and/or
SwitchGear Genomics)
About This Section
TryGeneCards Plus | Regulatory elements:
 Search for regulatory transcription factor binding sites for MIR193A
Other transcription factors
Search Chromatin IP Primers for MIR193A
Epigenetics:
| | DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MIR193A |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 17q11.2 Ensembl cytogenetic band: 17q11.2 HGNC cytogenetic band: 17q11.2MIR193A Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17P029887: view genomic region (via miRBase)
(about GC identifiers)
Start:
|
29,887,015 bp from pter |
End:
|
29,887,102 bp from pter |
Size:
|
88 bases |
Orientation:
|
plus strand |
|
Proteins
for MIR193A gene
(According to
1UniProtKB,
HORDE,
2neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to PhosphoSitePlus,
Specific Peptides from DME,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Cloud-Clone Corp.,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Cloud-Clone Corp.,
Antibodies by
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
LSBio,
Abcam, and/or
Cloud-Clone Corp.)
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UniProtKB: --
|
Domains /
Families
for MIR193A gene(According to HGNC, IUPHAR, InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
TryGeneCards Plus | HGNC Gene Families:
MIR: ncRNAs / Micro RNAs
-- |
Function
for MIR193A gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
genOway,
transcription factor targeting from QIAGEN
and/or HOMER,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
SwitchGear Genomics,
Gene Editing from DNA2.0,
Clones from OriGene,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
ESI BIO,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene.)
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Animal Models:
Cell Line
Products: |  | GenScript Custom overexpressing Cell Line Services for MIR193A | |  | Browse ESI BIO Cell Lines and PureStem Progenitors for MIR193A  | In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIR193A |
Localization
for MIR193A gene
(According to UniProtKB, COMPARTMENTS Subcellular localization database,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene.)
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Pathways & Interactions
for MIR193A gene
(SuperPaths according to PathCards,
Pathways according to
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Sino Biological,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
QIAGEN,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene).
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Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for MIR193A
Interactions:
Search GeneGlobe Interaction Network for MIR193A
|
Drugs & Compounds
for MIR193A gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience,
ApexBio,
HMDB,
BitterDB, and/or
Novoseek,
Ligands according to IUPHAR,
and Drugs according to DrugBank,
Enzo Life Sciences, and/or
PharmGKB)
About This Section
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 Browse compounds at ApexBio
 Browse Tocris compounds for MIR193A
|
Transcripts
for MIR193A gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
Conferences by KenesGroup,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
SwitchGear Genomics,
Tagged/untagged cDNA clones from
OriGene,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene, and/or
QIAGEN
)
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1 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000384882(miRNA)
GeneLoc Exon Structure
|
Expression
for MIR193A gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
Protein expression images according to data from SPIRE 1MOPED,
2PaxDb, and 3MaxQB,
plus additional links to
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
QIAGEN,
Primers from
OriGene, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
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Expression evidence for MIR193A:none
See probesets specificity/sensitivity at GeneAnnot
CGAP TAG: --
MIR193A Protein expression data from MOPED1, PaxDb2 and
MaxQB3:  --
Custom PCR Arrays for MIR193A
Primer
Products: |  | Browse OriGene qPCR
| | | Search Pre-validated RT2 qPCR
Primer Assays in human, mouse, rat MIR193A | | | Search QuantiTect SYBR Green Assays in human, mouse, rat MIR193A | | | QuantiFast Probe-based Assays in human, mouse, rat MIR193A | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIR193A |
Orthologs
for MIR193A gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
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This gene was present in the common ancestor of chordates.
Orthologs for MIR193A gene from Selected species (see all 7) About this table
Species with no ortholog for MIR193A
ENSEMBL Gene Tree for MIR193A (if available)
TreeFam Gene Tree for MIR193A (if available) |
Paralogs
for MIR193A gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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Genomic Variants
for MIR193A gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
4UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD), the Human Cytochrome P450 Allele
Nomenclature Database, and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
About This Section
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| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 17 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for MIR193A (29887015 - 29887102 bp)
Structural Variations
Database of Genomic Variants (DGV) variations for MIR193A: --
| | Site Specific Mutation Identification with PCR Assays |
|
Disorders
/ Diseases
for MIR193A gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Conferences by KenesGroup,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
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OMIM gene information: 614733
OMIM disorders: --
10  diseases for MIR193A:
About MalaCardsacute myeloid leukemia endometrial adenocarcinoma cervical cancer myeloid leukemia
cervicitis lung cancer ischemia leukemia
breast cancer adenocarcinoma
MIR193A for disorders About GeneDecksing
Export disorders for MIR193A gene to outside databases
|
Publications
for MIR193A gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
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PubMed articles for MIR193A gene, integrated from 10 sources (see all 16):
(articles sorted by number of sources associating them with MIR193A) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- A novel miR-193a-5p-YY1-APC regulatory axis in human endometrioid endometrial adenocarcinoma. (PubMed id 22907428)1 Yang Y....Wang H. (Oncogene 2013)
- Gain-of-function microRNA screens identify miR-193a regulating proliferation and apoptosis in epithelial ovarian cancer cells. (PubMed id 23588298)1 Nakano H....Yoshida T. (Int. J. Oncol. 2013)
- Epigenetic silencing of microRNA-193a contributes to leukemogenesis in t(8;21) acute myeloid leukemia by activating the PTEN/PI3K signal pathway. (PubMed id 23223432)1 Li Y....Yu L. (Blood 2013)
- Interleukin enhancer-binding factor 3 promotes breast tumor progression by regulating sustained urokinase-type plasminogen activator expression. (PubMed id 22986534)1 Hu Q....Huang S. (Oncogene 2013)
- Potentiality of a triple microRNA classifier: miR-193a-3p, miR-23a and miR-338-5p for early detection of colorectal cancer. (PubMed id 23758639)1 Yong F.L....Wang C.W. (BMC Cancer 2013)
- Ionizing radiation-inducible microRNA miR-193a-3p induces apoptosis by directly targeting Mcl-1. (PubMed id 23546867)1 Kwon J.E....Han Y.H. (Apoptosis 2013)
- MicroRNA-193 pro-proliferation effects for bone mesenchymal stem cells after low-level laser irradiation treatment through inhibitor of growth family, member 5. (PubMed id 22384930)1 Wang J....Zhang H. (Stem Cells Dev. 2012)
- Global microRNA level regulation of EGFR-driven cell-cycle protein network in breast cancer. (PubMed id 22333974)1 Uhlmann S....Sahin O. (Mol. Syst. Biol. 2012)
- Micro-RNA profiling as biomarkers in flap ischemia-reperfusion injury. (PubMed id 23097335)1 Chang K.P. and Lai C.S. (Microsurgery 2012)
- MicroRNA-193a represses c-kit expression and functions as a methylation-silenced tumor suppressor in acute myeloid leukemia. (PubMed id 21399664)1 Gao X.N....Yu L. (Oncogene 2011)
|
External Searches for MIR193A gene (in PubMed,
OMIM, and NCBI Bookshelf)
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Genome Databases showing MIR193A gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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|
Other Databases showing MIR193A gene
(According to HUGE)
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Specialized Databases showing MIR193A gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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| Name | Description |
| PharmGKB entry for MIR193A | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
TryGeneCards Plus | Patent Information for MIR193A gene:
Search GeneIP for patents involving MIR193A
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for MIR193A gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or
ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory,
genOway)
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 | |
 |
| | | | |
 |
 |
|  | Block miRNA regulation of human, mouse, rat MIR193A using miScript Target Protectors | | SeqTarget long-range PCR primers for resequencing MIR193A | | | DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MIR193A | | Predesigned siRNA for gene silencing in human, mouse, rat MIR193A | | | QuantiFast Probe-based Assays in human, mouse, rat MIR193A | | Search QuantiTect SYBR Green Assays in human, mouse, rat MIR193A | | | Custom PCR Arrays for MIR193A | | Search Chromatin IP Primers for MIR193A | | | Search Pre-validated RT2 qPCR Primer Assays in human, mouse, rat MIR193A | | Search GeneGlobe Interaction Network for MIR193A | | | Search Regulatory tfbs for MIR193A |
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 |  |  |  | |
| | | Search Tocris compounds for MIR193A |
| | |  |  |  |
 | | | | |
 |
 |
 |  | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIR193A |
| |  |  |  |  | | | Search ThermoFisher Antibodies for MIR193A |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat MIR193A |
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