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Aliases for MIR1909 Gene

Subcategory (RNA class) for MIR1909 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1909 Gene

  • MicroRNA 1909 2 3
  • Hsa-Mir-1909 3
  • MIRN1909 3

External Ids for MIR1909 Gene

Previous Symbols for MIR1909 Gene

  • MIRN1909

Summaries for MIR1909 Gene

Entrez Gene Summary for MIR1909 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1909 Gene

MIR1909 (MicroRNA 1909) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1909 Gene

Genomics for MIR1909 Gene

Genomic Location for MIR1909 Gene

Start:
1,816,159 bp from pter
End:
1,816,238 bp from pter
Size:
80 bases
Orientation:
Minus strand

Genomic View for MIR1909 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR1909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1909 Gene

No data available for Regulatory Elements for MIR1909 Gene

Proteins for MIR1909 Gene

Post-translational modifications for MIR1909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1909 Gene

Domains for MIR1909 Gene

Gene Families for MIR1909 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR1909: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR1909 Gene

Function for MIR1909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR1909 Gene

Localization for MIR1909 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR1909 Gene

Pathways for MIR1909 Gene

SuperPathways for MIR1909 Gene

No Data Available

Interacting Proteins for MIR1909 Gene

Gene Ontology (GO) - Biological Process for MIR1909 Gene

None

No data available for Pathways by source for MIR1909 Gene

Transcripts for MIR1909 Gene

mRNA/cDNA for MIR1909 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1909 Gene

No ASD Table

Relevant External Links for MIR1909 Gene

GeneLoc Exon Structure for
MIR1909
ECgene alternative splicing isoforms for
MIR1909

Expression for MIR1909 Gene

mRNA expression in normal human tissues for MIR1909 Gene

genes like me logo Genes that share expressions with MIR1909: view

Orthologs for MIR1909 Gene

Evolution for MIR1909 Gene

ENSEMBL:
Gene Tree for MIR1909 (if available)
TreeFam:
Gene Tree for MIR1909 (if available)

No data available for Orthologs for MIR1909 Gene

Paralogs for MIR1909 Gene

No data available for Paralogs for MIR1909 Gene

Variants for MIR1909 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR1909 Gene

Variant ID Type Subtype PubMed ID
dgv3583n71 CNV Loss 21882294
esv32942 CNV Gain+Loss 17666407
nsv910499 CNV Loss 21882294
dgv3609n71 CNV Loss 21882294
dgv3612n71 CNV Loss 21882294
nsv910545 CNV Loss 21882294
dgv3613n71 CNV Loss 21882294
dgv3614n71 CNV Loss 21882294
nsv910550 CNV Loss 21882294
nsv470107 CNV Loss 18288195
dgv3615n71 CNV Loss 21882294
dgv3616n71 CNV Loss 21882294
nsv910566 CNV Gain+Loss 21882294
dgv3617n71 CNV Loss 21882294
nsv910569 CNV Loss 21882294
dgv567n67 CNV Gain 20364138
nsv828384 CNV Gain 20364138

Relevant External Links for MIR1909 Gene

HapMap Linkage Disequilibrium report
MIR1909

No data available for Sequence variations from dbSNP and Humsavar for MIR1909 Gene

Disorders for MIR1909 Gene

No disorders were found for MIR1909 Gene.

No data available for UniProtKB/Swiss-Prot for MIR1909 Gene

Publications for MIR1909 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries. (PMID: 18583537) Bar M. … Tewari M. (Stem Cells 2008) 3
  3. Short GC-rich RNA similar to miR 1909 and 1915 folds in silico with the 5'-UTR and ORF of Notch and responders: potential for the elimination of cancer stem cells. (PMID: 21042738) Li Y. … Ioannides C.G. (Oncol. Rep. 2010) 3

Products for MIR1909 Gene

Sources for MIR1909 Gene

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