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Aliases for MIR181A2HG Gene

Subcategory (RNA class) for MIR181A2HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR181A2HG Gene

  • MIR181A2 Host Gene 2 3 5
  • MIR181A2 Host Gene (Non-Protein Coding) 2

External Ids for MIR181A2HG Gene

Previous GeneCards Identifiers for MIR181A2HG Gene

  • GC00U929367
  • GC09P127421

Summaries for MIR181A2HG Gene

GeneCards Summary for MIR181A2HG Gene

MIR181A2HG (MIR181A2 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR181A2HG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR181A2HG Gene

Genomics for MIR181A2HG Gene

GeneHancer (GH) Regulatory Elements for MIR181A2HG Gene

Promoters and enhancers for MIR181A2HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I124656 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 558.8 +1.0 955 5 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 IRF4 YY1 MIR181A2HG PRPS1P2 MIR181A2 MIR181B2 GAPVD1 GOLGA1 PIR50063 NR6A1
GH09I124592 Enhancer 1.3 Ensembl ENCODE dbSUPER 19.7 -63.7 -63700 5.4 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B DMAP1 YY1 ETS1 RXRA MIR181A2HG PRPS1P2 MIR181A2 MIR181B2 ENSG00000231149 NR5A1 GAPVD1 LOC100419284 PIR56415 NR6A1
GH09I124768 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 7.8 +112.2 112217 3.5 CLOCK MLX FEZF1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ENSG00000236643 NR6A1 PRPS1P2 GAPVD1 GOLGA1 WDR38 RPL35 ARPC5L MIR181A2HG
GH09I124799 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 7.5 +142.9 142877 3.3 CTCF EBF1 ZIC2 RFX5 ZNF335 GLIS1 IKZF1 MLLT1 IKZF2 SPI1 OLFML2A WDR38 ARPC5L RPL35 GAPVD1 RNU6-1020P MIR181A2HG PIR55692
GH09I124502 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 7 -152.9 -152878 5.9 ELF3 MLX ZFP64 ARID4B DMAP1 DNMT3B ZNF48 ZSCAN9 SLC30A9 ZNF335 NR5A1 MIR181A2HG PRPS1P2 LOC105376270
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR181A2HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR181A2HG Gene

Genomic Locations for MIR181A2HG Gene
chr9:124,658,436-124,698,631
(GRCh38/hg38)
Size:
40,196 bases
Orientation:
Plus strand
chr9:127,420,715-127,460,910
(GRCh37/hg19)

Genomic View for MIR181A2HG Gene

Genes around MIR181A2HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR181A2HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR181A2HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR181A2HG Gene

Proteins for MIR181A2HG Gene

Post-translational modifications for MIR181A2HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR181A2HG Gene

Domains & Families for MIR181A2HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR181A2HG Gene

Function for MIR181A2HG Gene

Phenotypes From GWAS Catalog for MIR181A2HG Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR181A2HG Gene

Localization for MIR181A2HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR181A2HG Gene

Pathways & Interactions for MIR181A2HG Gene

SuperPathways for MIR181A2HG Gene

No Data Available

Interacting Proteins for MIR181A2HG Gene

Gene Ontology (GO) - Biological Process for MIR181A2HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR181A2HG Gene

Drugs & Compounds for MIR181A2HG Gene

No Compound Related Data Available

Transcripts for MIR181A2HG Gene

mRNA/cDNA for MIR181A2HG Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MIR181A2HG Gene

MIR181A2 host gene (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR181A2HG Gene

No ASD Table

Relevant External Links for MIR181A2HG Gene

GeneLoc Exon Structure for
MIR181A2HG
ECgene alternative splicing isoforms for
MIR181A2HG

Expression for MIR181A2HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR181A2HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR181A2HG Gene

This gene is overexpressed in Thyroid (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of MIR181A2HG Gene:

MIR181A2HG

SOURCE GeneReport for Unigene cluster for MIR181A2HG Gene:

Hs.660412
genes like me logo Genes that share expression patterns with MIR181A2HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR181A2HG Gene

Orthologs for MIR181A2HG Gene

Evolution for MIR181A2HG Gene

ENSEMBL:
Gene Tree for MIR181A2HG (if available)
TreeFam:
Gene Tree for MIR181A2HG (if available)

No data available for Orthologs for MIR181A2HG Gene

Paralogs for MIR181A2HG Gene

No data available for Paralogs for MIR181A2HG Gene

Variants for MIR181A2HG Gene

Sequence variations from dbSNP and Humsavar for MIR181A2HG Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000032972 -- 124,686,452(+) C/T intron_variant
rs1000058003 -- 124,692,233(+) CATTCA/CA intron_variant
rs1000081477 -- 124,668,420(+) G/A intron_variant
rs1000145526 -- 124,676,994(+) T/C intron_variant
rs1000152779 -- 124,690,516(+) T/C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR181A2HG Gene

Variant ID Type Subtype PubMed ID
nsv831721 CNV gain 17160897

Additional Variant Information for MIR181A2HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR181A2HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR181A2HG Gene

Disorders for MIR181A2HG Gene

Additional Disease Information for MIR181A2HG

No disorders were found for MIR181A2HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR181A2HG Gene

Publications for MIR181A2HG Gene

  1. Solution structure of a ubiquitin-like domain from tubulin-binding cofactor B. (PMID: 15364906) Lytle BL … Volkman BF (The Journal of biological chemistry 2004) 2 3 58
  2. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M … Kato S (Investigative ophthalmology & visual science 2011) 3 58
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for MIR181A2HG Gene

Sources for MIR181A2HG Gene

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