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Aliases for MIR1538 Gene

Subcategory (RNA class) for MIR1538 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1538 Gene

  • MicroRNA 1538 2 3
  • Hsa-Mir-1538 3
  • MIRN1538 3

External Ids for MIR1538 Gene

Previous HGNC Symbols for MIR1538 Gene

  • MIRN1538

Previous GeneCards Identifiers for MIR1538 Gene

  • GC00U923100
  • GC16M068158

Summaries for MIR1538 Gene

Entrez Gene Summary for MIR1538 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1538 Gene

MIR1538 (MicroRNA 1538) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1538 Gene

Genomics for MIR1538 Gene

Genomic Location for MIR1538 Gene

Chromosome:
16
Start:
69,565,808 bp from pter
End:
69,565,868 bp from pter
Size:
61 bases
Orientation:
Minus strand

Genomic View for MIR1538 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR1538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1538 Gene

ORGUL Member Location for MIR1538 Gene

ORGUL Member Location for MIR1538 gene

No data available for Regulatory Elements for MIR1538 Gene

Proteins for MIR1538 Gene

Post-translational modifications for MIR1538 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1538 Gene

Domains & Families for MIR1538 Gene

Gene Families for MIR1538 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1538: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1538 Gene

Function for MIR1538 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1538 Gene

Localization for MIR1538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1538 Gene

Pathways & Interactions for MIR1538 Gene

SuperPathways for MIR1538 Gene

No Data Available

Interacting Proteins for MIR1538 Gene

Gene Ontology (GO) - Biological Process for MIR1538 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1538 Gene

Drugs & Compounds for MIR1538 Gene

No Compound Related Data Available

Transcripts for MIR1538 Gene

mRNA/cDNA for MIR1538 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1538 Gene

No ASD Table

Relevant External Links for MIR1538 Gene

GeneLoc Exon Structure for
MIR1538
ECgene alternative splicing isoforms for
MIR1538

Expression for MIR1538 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR1538 Gene

Orthologs for MIR1538 Gene

Evolution for MIR1538 Gene

ENSEMBL:
Gene Tree for MIR1538 (if available)
TreeFam:
Gene Tree for MIR1538 (if available)

No data available for Orthologs for MIR1538 Gene

Paralogs for MIR1538 Gene

No data available for Paralogs for MIR1538 Gene

Variants for MIR1538 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR1538 Gene

Variant ID Type Subtype PubMed ID
nsv1852 CNV Loss 18451855

Relevant External Links for MIR1538 Gene

HapMap Linkage Disequilibrium report
MIR1538

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for MIR1538 Gene

Disorders for MIR1538 Gene

Relevant External Links for MIR1538

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1538
genes like me logo Genes that share disorders with MIR1538: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1538 Gene

Publications for MIR1538 Gene

  1. Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing. (PMID: 18524951) Azuma-Mukai A. … Siomi M.C. (Proc. Natl. Acad. Sci. U.S.A. 2008) 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR1538 Gene

Sources for MIR1538 Gene

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