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MIR145 Gene

RNA gene   GIFtS: 22
GCID: GC05P148810

MicroRNA 145


(Previous symbol: MIRN145)
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Subcategory (RNA class): miRNA

Quality score for this RNA gene is 3

Aliases
MicroRNA 1451 2
MIRN1451 2 5
miR-1452
miRNA1452
mir-1459

External Ids:    HGNC: 315321   Entrez Gene: 4069372   Ensembl: ENSG000002699367   OMIM: 6117955   

Export aliases for MIR145 gene to outside databases

Previous GC identifer: GC05P148794


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Entrez Gene summary for MIR145 Gene:
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of
gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are
transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can
be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme
to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the
cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The
mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through
imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of
the target mRNA. The RefSeq represents the predicted microRNA stem-loop. (provided by RefSeq, Sep 2009)

GeneCards Summary for MIR145 Gene:
MIR145 (microRNA 145) is an RNA gene, and is affiliated with the miRNA class. Diseases associated with MIR145 include 5q- syndrome, and lung adenocarcinoma.




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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Regulatory elements:
   Search for regulatory transcription factor binding sites for MIR145
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for MIR145

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MIR145


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q32   Ensembl cytogenetic band:  5q32   HGNC cytogenetic band: 5q32

MIR145 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MIR145 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P148810:  view genomic region (via miRBase)     (about GC identifiers)

Start:
148,809,849 bp from pter      End:
148,812,397 bp from pter
Size:
2,549 bases      Orientation:
plus strand
ORGUL member locations:
Legend (see complete legend)

ORGUL Member Locations for MIR145

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB: --


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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HGNC Gene Families:
MIR: ncRNAs / Micro RNAs

  --

(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Animal Models:
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(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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  --

(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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SuperPaths for MIR145 About    
See pathways by source

SuperPathContained pathways About
1SRF and miRs in Smooth Muscle Differentiation and Proliferation
SRF and miRs in Smooth Muscle Differentiation and Proliferation
2miRNAs involved in DDR
miRNAs involved in DDR
3MicroRNAs in cancer
MicroRNAs in cancer
4Heart Development
Heart Development

Pathways by source                                                                                                                                                                 See SuperPaths
Show all pathways


3 BioSystems Pathways for MIR145
    Heart Development
miRNAs involved in DDR
SRF and miRs in Smooth Muscle Differentiation and Proliferation


1 Kegg Pathway  (Kegg details for MIR145):
    MicroRNAs in cancer


MIR145 for pathways           About GeneDecksing

    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for MIR145
Interactions:

    Search GeneGlobe Interaction Network for MIR145

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for MIR145



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000602315(lincRNA) ENST00000384967(lincRNA)
miRNA
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GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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Expression evidence for MIR145:none

See probesets specificity/sensitivity at GeneAnnot
CGAP TAG: --


MIR145 expression in embryonic tissues and stem cells    About this table
Data from LifeMap, the Embryonic Development and Stem Cells Database
 selected tissues (see all 5) fully expand
 
 Epithelial Cells
         Limbal Superbasal Epithelial Cells Limbus Epithelium
 
 Eye (Sensory Organs)
         Limbal Superbasal Epithelial Cells Limbus Epithelium
 
 NULL (Uncategorized)    fully expand to see all 2 entries
         Mesoderm-like cells
 
 Heart (Cardiovascular System)
         Cardiomyocyte-like progenitor cells
 
 Adipose (Muscoskeletal System)
         White adipocyte-like cells
MIR145 Protein expression data from MOPED1, PaxDb2 and MaxQB3 --
    Custom PCR Arrays for MIR145
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In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIR145

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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This gene was present in the common ancestor of chordates.

Orthologs for MIR145 gene from Selected species (see all 9)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
chicken
(Gallus gallus)
Aves --
--
79(a)
1 ↔ 1
13(7833523-7833616) ENSGALG00000028396
lizard
(Anolis carolinensis)
Reptilia aca-mir-1456
aca-mir-145
90(a)
1 ↔ 1
2(122657695-122657781)
zebrafish
(Danio rerio)
Actinopterygii BX088707.16
dre-mir-1456
dre-mir-145
59(a)
59(a)
many → 1
many → 1
14(40240393-40240505)
14(40133370-40133482)
        Species with no ortholog for MIR145

ENSEMBL Gene Tree for MIR145 (if available)
TreeFam Gene Tree for MIR145 (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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  --

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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Site Specific Mutation Identification with PCR Assays
Search QIAGEN SeqTarget long-range PCR primers for resequencing MIR145
DNA2.0 Custom Variant and Variant Library Synthesis for MIR145

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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OMIM gene information: 611795    OMIM disorders: --

Selected diseases for MIR145 (see all 32):    
About MalaCards
5q- syndrome    lung adenocarcinoma    endometrial adenocarcinoma    esophageal squamous cell carcinoma
kawasaki disease    hypoxia    systemic lupus erythematosus    cervical cancer
neuroblastoma    osteosarcoma    lupus erythematosus    esophagitis
squamous cell carcinoma    cervicitis    adenocarcinoma    ischemia
lung cancer    endometriosis    endotheliitis    ulcerative colitis


MIR145 for disorders           About GeneDecksing

Genetic Association Database (GAD): MIR145
Human Genome Epidemiology (HuGE) Navigator: MIR145 (2 documents)

Export disorders for MIR145 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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PubMed articles for MIR145 gene, integrated from 10 sources (see all 121):
(articles sorted by number of sources associating them with MIR145)
    Utopia: connect your pdf to the dynamic
world of online information

  1. MicroRNA-145 inhibits the growth, invasion, metastasis and angiogenesis of neuroblastoma cells through targeting hypoxia-inducible factor 2 alpha. (PubMed id 23222716)1 Zhang H....Tong Q. (Oncogene 2014)
  2. Downregulation of miR-145 expression in oral squamous cell carcinomas and its clinical significance. (PubMed id 23548968)1 Gao L....Huang C. (Onkologie 2013)
  3. Deregulated expression of miR-145 in manifold human cancer cells. (PubMed id 23714355)1 Xing A.Y....Gao P. (Exp. Mol. Pathol. 2013)
  4. The role of miR-145 in microvasculature. (PubMed id 23875242)1 Ji L.Y....Dong N.N. (Pharmazie 2013)
  5. Differential expression of miR-145 in children with Kawasaki disease. (PubMed id 23483985)1 Shimizu C....Burns J.C. (PLoS ONE 2013)
  6. miR-145 overexpression suppresses the migration and invasion of metastatic melanoma cells. (PubMed id 23404256)1 Dynoodt P....Van Gele M. (Int. J. Oncol. 2013)
  7. Regulation of ABCA1 protein expression and function in hepatic and pancreatic islet cells by miR-145. (PubMed id 24135019)1 Kang M.H....Hayden M.R. (Arterioscler. Thromb. Vasc. Biol. 2013)
  8. Overexpression of microRNA-145 in atherosclerotic plaques from hypertensive patients. (PubMed id 23339529)1 Santovito D....Cipollone F. (Expert Opin. Ther. Targets 2013)
  9. Loss of microRNA-143/145 disturbs cellular growth and apoptosis of human epithelial cancers by impairing the MDM2-p53 feedback loop. (PubMed id 22330136)1 Zhang J....Chen W.T. (Oncogene 2013)
  10. Serum circulating microRNA profiling for identification of potential breast cancer biomarkers. (PubMed id 23334650)1 Mar-Aguilar F....ResAcndez-PAcrez D. (Dis. Markers 2013)

(in PubMed, OMIM, and NCBI Bookshelf)
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 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 406937 HGNC: 31532 Ensembl:ENSG00000269936 miRBase: hsa-mir-145 euGenes: HUgn406937
ECgene: MIR145 Kegg: 406937 H-InvDB: MIR145

(According to HUGE)
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(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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NameDescription
PharmGKB entry for MIR145 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
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Patent Information for MIR145 gene:
Search GeneIP for patents involving MIR145

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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