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Aliases for MIR143HG Gene

Subcategory (RNA class) for MIR143HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR143HG Gene

  • MIR143 Host Gene 2 3
  • MIR143 Host Gene (Non-Protein Coding) 2 3
  • Cardiac Mesoderm Enhancer-Associated Noncoding RNA 3
  • CARMEN 3

External Ids for MIR143HG Gene

Previous GeneCards Identifiers for MIR143HG Gene

  • GC05P148796

Summaries for MIR143HG Gene

GeneCards Summary for MIR143HG Gene

MIR143HG (MIR143 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR143HG Gene

Genomics for MIR143HG Gene

Genomic Location for MIR143HG Gene

Chromosome:
5
Start:
149,406,689 bp from pter
End:
149,432,836 bp from pter
Size:
26,148 bases
Orientation:
Plus strand

Genomic View for MIR143HG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MIR143HG Gene

No data available for Regulatory Elements for MIR143HG Gene

Proteins for MIR143HG Gene

Post-translational modifications for MIR143HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR143HG Gene

Domains & Families for MIR143HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR143HG Gene

Function for MIR143HG Gene

Phenotypes for MIR143HG Gene

GenomeRNAi human phenotypes for MIR143HG:
genes like me logo Genes that share phenotypes with MIR143HG: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR143HG Gene

Localization for MIR143HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR143HG Gene

Pathways & Interactions for MIR143HG Gene

SuperPathways for MIR143HG Gene

No Data Available

Interacting Proteins for MIR143HG Gene

Gene Ontology (GO) - Biological Process for MIR143HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR143HG Gene

Drugs & Compounds for MIR143HG Gene

No Compound Related Data Available

Transcripts for MIR143HG Gene

mRNA/cDNA for MIR143HG Gene

(10) Additional mRNA sequences :
(15) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MIR143HG Gene

MIR143 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR143HG Gene

No ASD Table

Relevant External Links for MIR143HG Gene

GeneLoc Exon Structure for
MIR143HG
ECgene alternative splicing isoforms for
MIR143HG

Expression for MIR143HG Gene

mRNA expression in normal human tissues for MIR143HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR143HG Gene

This gene is overexpressed in Esophagus - Gastroesophageal Junction (x6.3), Artery - Tibial (x5.2), Esophagus - Muscularis (x4.9), Colon - Sigmoid (x4.5), Artery - Coronary (x4.4), and Artery - Aorta (x4.1).

SOURCE GeneReport for Unigene cluster for MIR143HG Gene Hs.744892

genes like me logo Genes that share expression patterns with MIR143HG: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR143HG Gene

Orthologs for MIR143HG Gene

Evolution for MIR143HG Gene

ENSEMBL:
Gene Tree for MIR143HG (if available)
TreeFam:
Gene Tree for MIR143HG (if available)

No data available for Orthologs for MIR143HG Gene

Paralogs for MIR143HG Gene

No data available for Paralogs for MIR143HG Gene

Variants for MIR143HG Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR143HG Gene

Variant ID Type Subtype PubMed ID
nsv521406 CNV Loss 19592680
nsv528923 CNV Loss 19592680
nsv519878 CNV Loss 19592680
nsv516607 CNV Loss 19592680
esv2668220 CNV Deletion 23128226

Relevant External Links for MIR143HG Gene

HapMap Linkage Disequilibrium report
MIR143HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for MIR143HG Gene

Disorders for MIR143HG Gene

Relevant External Links for MIR143HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR143HG
genes like me logo Genes that share disorders with MIR143HG: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR143HG Gene

Publications for MIR143HG Gene

  1. CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis. (PMID: 26423156) Ounzain S. … Pedrazzini T. (J. Mol. Cell. Cardiol. 2015) 67
  2. miR-145 participates with TP53 in a death-promoting regulatory loop and targets estrogen receptor-alpha in human breast cancer cells. (PMID: 19730444) Spizzo R. … Calin G.A. (Cell Death Differ. 2010) 67
  3. Repression of the miR-143/145 cluster by oncogenic Ras initiates a tumor-promoting feed-forward pathway. (PMID: 21159816) Kent O.A. … Mendell J.T. (Genes Dev. 2010) 67
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for MIR143HG Gene

Sources for MIR143HG Gene

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