Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR1302-11 Gene

Subcategory (RNA class) for MIR1302-11 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1302-11 Gene

  • MicroRNA 1302-11 2 3 5
  • Hsa-Mir-1302-11 3

External Ids for MIR1302-11 Gene

Previous GeneCards Identifiers for MIR1302-11 Gene

  • GC19U901415
  • GC19P000072
  • GC09P000029
  • GC19P000074
  • GC19P000079
  • GC19P000084
  • GC19P000088

Summaries for MIR1302-11 Gene

Entrez Gene Summary for MIR1302-11 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1302-11 Gene

MIR1302-11 (MicroRNA 1302-11) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1302-11 Gene

Genomics for MIR1302-11 Gene

Regulatory Elements for MIR1302-11 Gene

Enhancers for MIR1302-11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G000075 0.2 Ensembl 0.7 +4.3 4318 1.0 MIR1302-11 FAM138F
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1302-11 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1302-11 Gene

Chromosome:
19
Start:
71,973 bp from pter
End:
72,110 bp from pter
Size:
138 bases
Orientation:
Plus strand

Genomic View for MIR1302-11 Gene

Genes around MIR1302-11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1302-11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1302-11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1302-11 Gene

Proteins for MIR1302-11 Gene

Post-translational modifications for MIR1302-11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1302-11 Gene

Domains & Families for MIR1302-11 Gene

Gene Families for MIR1302-11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1302-11: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1302-11 Gene

Function for MIR1302-11 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1302-11 Gene

Localization for MIR1302-11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1302-11 Gene

Pathways & Interactions for MIR1302-11 Gene

SuperPathways for MIR1302-11 Gene

No Data Available

Interacting Proteins for MIR1302-11 Gene

Gene Ontology (GO) - Biological Process for MIR1302-11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1302-11 Gene

Drugs & Compounds for MIR1302-11 Gene

No Compound Related Data Available

Transcripts for MIR1302-11 Gene

mRNA/cDNA for MIR1302-11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1302-11 Gene

No ASD Table

Relevant External Links for MIR1302-11 Gene

GeneLoc Exon Structure for
MIR1302-11
ECgene alternative splicing isoforms for
MIR1302-11

Expression for MIR1302-11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1302-11 Gene

genes like me logo Genes that share expression patterns with MIR1302-11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1302-11 Gene

Orthologs for MIR1302-11 Gene

Evolution for MIR1302-11 Gene

ENSEMBL:
Gene Tree for MIR1302-11 (if available)
TreeFam:
Gene Tree for MIR1302-11 (if available)

No data available for Orthologs for MIR1302-11 Gene

Paralogs for MIR1302-11 Gene

No data available for Paralogs for MIR1302-11 Gene

Variants for MIR1302-11 Gene

Sequence variations from dbSNP and Humsavar for MIR1302-11 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1011744864 -- 71,312(+) CGGCT(C/T)CTCCG nc-transcript-variant, upstream-variant-2KB
rs1021810710 -- 71,398(+) CTACG(C/T)CTTGA nc-transcript-variant, upstream-variant-2KB
rs1040646330 -- 71,121(+) TCGCG(A/G)GCCTG upstream-variant-2KB
rs1048255158 -- 70,551(+) CGAGG(A/C)TTCCC intron-variant, upstream-variant-2KB
rs1053357050 -- 71,238(+) CTCTT(C/T)CTAGA nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1302-11 Gene

Variant ID Type Subtype PubMed ID
dgv1278n106 CNV duplication 24896259
dgv1664n106 CNV duplication 24896259
dgv1956e59 CNV duplication 20981092
dgv1957e59 CNV duplication 20981092
dgv1e59 CNV duplication 20981092
dgv3939n106 CNV duplication 24896259
dgv4273e59 CNV duplication 20981092
esv22059 CNV gain+loss 19812545
esv23366 CNV gain+loss 19812545
esv27265 CNV gain+loss 19812545
esv27561 CNV gain 19812545
esv3433926 CNV duplication 20981092
esv994482 CNV gain 20482838
nsv1075907 CNV duplication 25765185
nsv1076307 CNV duplication 25765185
nsv1076458 CNV duplication 25765185
nsv1147468 CNV duplication 26484159
nsv1147785 CNV duplication 26484159
nsv1148144 CNV duplication 26484159
nsv1695 CNV insertion 18451855
nsv428112 CNV gain 18775914
nsv469759 CNV gain 16826518
nsv471520 CNV gain 19718026
nsv471523 CNV gain 19718026
nsv471591 CNV loss 15918152
nsv482937 CNV loss 15286789
nsv570923 CNV gain 21841781
nsv7879 CNV gain+loss 18304495
nsv820527 CNV duplication 20802225
nsv820962 CNV duplication 20802225
nsv8400 CNV gain+loss 18304495
nsv9315 CNV gain+loss 18304495
nsv945699 CNV duplication 23825009
nsv952893 CNV duplication 24416366
nsv960766 CNV duplication 23825009
nsv961258 CNV duplication 23825009
nsv9651 CNV gain+loss 18304495
nsv977765 CNV duplication 23825009
nsv977807 CNV duplication 23825009
nsv982187 CNV duplication 23825009
nsv982357 CNV duplication 23825009

Relevant External Links for MIR1302-11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1302-11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1302-11 Gene

Disorders for MIR1302-11 Gene

Relevant External Links for MIR1302-11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1302-11

No disorders were found for MIR1302-11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1302-11 Gene

Publications for MIR1302-11 Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1302-11 Gene

Sources for MIR1302-11 Gene

Content
Loading form....