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Aliases for MIR1301 Gene

Subcategory (RNA class) for MIR1301 Gene


Quality Score for this RNA gene is


Aliases for MIR1301 Gene

  • MicroRNA 1301 2 3 5
  • Hsa-Mir-1301 3
  • Mir-1301 3
  • MIRN1301 3

External Ids for MIR1301 Gene

Previous HGNC Symbols for MIR1301 Gene

  • MIRN1301

Previous GeneCards Identifiers for MIR1301 Gene

  • GC00U923084
  • GC02M025406
  • GC02M025551

Summaries for MIR1301 Gene

Entrez Gene Summary for MIR1301 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1301 Gene

MIR1301 (MicroRNA 1301) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1301 Gene

Genomics for MIR1301 Gene

Regulatory Elements for MIR1301 Gene

Enhancers for MIR1301 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F025288 1.1 FANTOM5 Ensembl ENCODE 12.1 +35.7 35721 8.4 HDGF TBL1XR1 ZNF48 ZBTB40 SCRT2 EGR2 ZNF263 JUNB REST ZNF623 DNMT3A MIR1301 LINC01381 POMC DNAJC27 GC02M025128
GH02F025272 1.1 FANTOM5 Ensembl ENCODE 12.1 +51.8 51794 8.7 HDGF PKNOX1 WRNIP1 SIN3A ZNF143 ZNF207 ZNF263 JUNB TBX21 SMARCA4 MIR1301 POMC DNAJC27 GC02M025128
GH02F025284 1.3 FANTOM5 Ensembl ENCODE 11.7 +42.5 42543 2.4 HDGF PKNOX1 NR2F1 MAX JUNB ZNF48 ETS1 GABPA POLR2A IKZF1 DNMT3A MIR1301 LINC01381 DNAJC27 GC02M025128
GH02F025591 0.9 Ensembl ENCODE 11.1 -263.4 -263362 1.0 IRF2 MTA2 HLF NBN JUNB IRF1 MIR1301 DTNB LOC101929272 GC02P025633 GC02P025491
GH02F025322 0.7 Ensembl ENCODE 0.8 +4.7 4704 3.2 USF1 MAX ZMYM3 YY1 ZFHX2 POLR2A NFYB NR2F6 HOMEZ EGR2 LOC101929272 DTNB POMC MIR1301 GC02M025128
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR1301 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1301 Gene

25,328,640 bp from pter
25,328,721 bp from pter
82 bases
Minus strand

Genomic View for MIR1301 Gene

Genes around MIR1301 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1301 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1301 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1301 Gene

ORGUL Member Location for MIR1301 Gene

ORGUL Member Location for MIR1301 gene

Proteins for MIR1301 Gene

Post-translational modifications for MIR1301 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1301 Gene

Domains & Families for MIR1301 Gene

Gene Families for MIR1301 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1301: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1301 Gene

Function for MIR1301 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1301 Gene

Localization for MIR1301 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1301 Gene

Pathways & Interactions for MIR1301 Gene

SuperPathways for MIR1301 Gene

No Data Available

Interacting Proteins for MIR1301 Gene

Gene Ontology (GO) - Biological Process for MIR1301 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1301 Gene

Transcripts for MIR1301 Gene

mRNA/cDNA for MIR1301 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1301 Gene

No ASD Table

Relevant External Links for MIR1301 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1301 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1301 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1301 Gene:

genes like me logo Genes that share expression patterns with MIR1301: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1301 Gene

Orthologs for MIR1301 Gene

Evolution for MIR1301 Gene

Gene Tree for MIR1301 (if available)
Gene Tree for MIR1301 (if available)

No data available for Orthologs for MIR1301 Gene

Paralogs for MIR1301 Gene

No data available for Paralogs for MIR1301 Gene

Variants for MIR1301 Gene

Sequence variations from dbSNP and Humsavar for MIR1301 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs115636207 -- 25,328,859(+) AGGGG(G/T)TGGTG intron-variant, upstream-variant-2KB
rs115644990 -- 25,328,465(+) AACAC(C/T)GTCCC intron-variant, downstream-variant-500B
rs115936684 -- 25,329,153(+) AAAAA(A/C)AAACC intron-variant, upstream-variant-2KB
rs12329362 -- 25,329,923(+) GGCAT(G/T)TGGAA intron-variant, upstream-variant-2KB
rs12463836 -- 25,330,224(+) TCATT(C/T)GATTA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1301 Gene

Variant ID Type Subtype PubMed ID
esv33372 CNV loss 17666407
nsv1008732 CNV loss 25217958
nsv581216 CNV loss 21841781
nsv581217 CNV loss 21841781
nsv581218 CNV loss 21841781
nsv828653 CNV loss 20364138

Relevant External Links for MIR1301 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1301 Gene

Disorders for MIR1301 Gene

Relevant External Links for MIR1301

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1301 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1301 Gene

Publications for MIR1301 Gene

  1. Identification of miRNAs that specifically target tumor suppressive KLF6-FL rather than oncogenic KLF6-SV1 isoform. (PMID: 24921656) Liang W.C. … Waye M.M. (RNA Biol 2014) 3 64
  2. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J. … Kaessmann H. (Genome Res. 2013) 3 64
  3. microRNA-1301-mediated inhibition of tumorigenesis. (PMID: 22159405) Fang L. … Yang G.S. (Oncol. Rep. 2012) 3 64
  4. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  5. Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas. (PMID: 19144710) Zhu J.Y. … Meister G. (J. Virol. 2009) 3 64

Products for MIR1301 Gene

Sources for MIR1301 Gene

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