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Aliases for MIR1296 Gene

Subcategory (RNA class) for MIR1296 Gene


Quality Score for this RNA gene is


Aliases for MIR1296 Gene

  • MicroRNA 1296 2 3 5
  • Hsa-Mir-1296 3
  • Mir-1296 3
  • MIRN1296 3

External Ids for MIR1296 Gene

Previous HGNC Symbols for MIR1296 Gene

  • MIRN1296

Previous GeneCards Identifiers for MIR1296 Gene

  • GC00U922842
  • GC10M064803
  • GC10M065132

Summaries for MIR1296 Gene

Entrez Gene Summary for MIR1296 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1296 Gene

MIR1296 (MicroRNA 1296) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1296 Gene

Genomics for MIR1296 Gene

Regulatory Elements for MIR1296 Gene

Enhancers for MIR1296 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F063375 0.6 Ensembl ENCODE 0.8 -3.4 -3410 2.9 MTA2 HLF JUN CEBPB CHD4 TBX21 ZBTB40 ZNF316 CEBPA IKZF1 JMJD1C-AS1 NRBF2 MRPL35P2 GC10M063361 MIR1296
GH10F063368 0.3 FANTOM5 0.8 +4.0 4041 0.3 RAD51 ZNF366 USF2 NRBF2 MIR1296 ENSG00000270421
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR1296 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1296 Gene

63,372,957 bp from pter
63,373,048 bp from pter
92 bases
Minus strand

Genomic View for MIR1296 Gene

Genes around MIR1296 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1296 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1296 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1296 Gene

ORGUL Member Location for MIR1296 Gene

ORGUL Member Location for MIR1296 gene

Proteins for MIR1296 Gene

Post-translational modifications for MIR1296 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1296 Gene

Domains & Families for MIR1296 Gene

Gene Families for MIR1296 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1296: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1296 Gene

Function for MIR1296 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1296 Gene

Localization for MIR1296 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1296 Gene

Pathways & Interactions for MIR1296 Gene

SuperPathways for MIR1296 Gene

No Data Available

Interacting Proteins for MIR1296 Gene

Gene Ontology (GO) - Biological Process for MIR1296 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1296 Gene

Transcripts for MIR1296 Gene

mRNA/cDNA for MIR1296 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1296 Gene

No ASD Table

Relevant External Links for MIR1296 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1296 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1296 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1296 Gene:

genes like me logo Genes that share expression patterns with MIR1296: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1296 Gene

Orthologs for MIR1296 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR1296 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-1296 35
  • 100 (a)
(Bos Taurus)
Mammalia bta-mir-1296 35
  • 97 (a)
(Canis familiaris)
Mammalia -- 35
  • 97 (a)
Species where no ortholog for MIR1296 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR1296 Gene

Gene Tree for MIR1296 (if available)
Gene Tree for MIR1296 (if available)

Paralogs for MIR1296 Gene

No data available for Paralogs for MIR1296 Gene

Variants for MIR1296 Gene

Sequence variations from dbSNP and Humsavar for MIR1296 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10995521 -- 63,373,053(+) TGATT(C/T)GTTGA intron-variant, upstream-variant-2KB
rs112787540 -- 63,374,597(+) CTATG(A/G)ATATA intron-variant, upstream-variant-2KB
rs12260434 -- 63,373,346(+) AGAAG(C/G)AGCCT intron-variant, upstream-variant-2KB
rs138527327 -- 63,373,563(+) CCACA(C/G)GAGGA intron-variant, upstream-variant-2KB
rs139075382 -- 63,373,928(+) TTGAC(C/G/T)ATTTT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1296 Gene

Variant ID Type Subtype PubMed ID
esv2677353 CNV deletion 23128226

Relevant External Links for MIR1296 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1296 Gene

Disorders for MIR1296 Gene

Relevant External Links for MIR1296

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1296 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1296 Gene

Publications for MIR1296 Gene

  1. Common genetic variants associated with cognitive performance identified using the proxy-phenotype method. (PMID: 25201988) Rietveld C.A. … Koellinger P.D. (Proc. Natl. Acad. Sci. U.S.A. 2014) 3 64
  2. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J. … Kaessmann H. (Genome Res. 2013) 3 64
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  4. Genome-wide association study identifies loci influencing concentrations of liver enzymes in plasma. (PMID: 22001757) Chambers J.C. … Kooner J.S. (Nat. Genet. 2011) 3 64
  5. Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing. (PMID: 19508715) Nygaard S. … Litman T. (BMC Med Genomics 2009) 3 64

Products for MIR1296 Gene

Sources for MIR1296 Gene

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