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Aliases for MIR1295A Gene

Subcategory (RNA class) for MIR1295A Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1295A Gene

  • MicroRNA 1295a 2 3 5
  • MicroRNA 1295 2 3
  • Hsa-Mir-1295a 3
  • Hsa-Mir-1295 3
  • Mir-1295a 3
  • MIRN1295 3
  • MIR1295 3

External Ids for MIR1295A Gene

Previous HGNC Symbols for MIR1295A Gene

  • MIRN1295
  • MIR1295

Summaries for MIR1295A Gene

Entrez Gene Summary for MIR1295A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1295A Gene

MIR1295A (MicroRNA 1295a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1295A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1295A Gene

Genomics for MIR1295A Gene

GeneHancer (GH) Regulatory Elements for MIR1295A Gene

Promoters and enhancers for MIR1295A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I171138 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -39.5 -39519 5.4 NFIB INSM2 MZF1 FEZF1 THRB ZSCAN9 RAD21 YY1 ZNF335 ZNF213 FMO3 MIR1295A FMO6P FMO2 LOC105371611
GH01I171157 Enhancer 0.7 ENCODE 10.9 -58.4 -58357 4.9 FOXA2 MAX CEBPG ZNF644 RAD21 RARA YY1 TEAD3 HNF4G CREM FMO3 MIR1295A FMO2 ENSG00000231424 FMO6P LOC105371611
GH01I171126 Enhancer 0.5 ENCODE dbSUPER 11.7 -25.7 -25744 1.6 ZFX FMO3 MIR1295A FMO6P LOC105371611
GH01I171113 Enhancer 0.5 ENCODE dbSUPER 0.4 -11.9 -11889 1.4 ZNF10 FMO3 ENSG00000231424 MIR1295A FMO6P
GH01I171110 Enhancer 0.4 ENCODE dbSUPER 0.4 -9.3 -9343 1.5 FMO6P FMO3 MIR1295A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1295A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1295A Gene

Genomic Locations for MIR1295A Gene
chr1:171,101,728-171,101,806
(GRCh38/hg38)
Size:
79 bases
Orientation:
Minus strand
chr1:171,070,869-171,070,947
(GRCh37/hg19)

Genomic View for MIR1295A Gene

Genes around MIR1295A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1295A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1295A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1295A Gene

ORGUL Member Location for MIR1295A Gene

ORGUL Member Location for MIR1295A gene

Proteins for MIR1295A Gene

Post-translational modifications for MIR1295A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1295A Gene

Domains & Families for MIR1295A Gene

Gene Families for MIR1295A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1295A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1295A Gene

Function for MIR1295A Gene

Phenotypes From GWAS Catalog for MIR1295A Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1295A Gene

Localization for MIR1295A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1295A Gene

Pathways & Interactions for MIR1295A Gene

SuperPathways for MIR1295A Gene

No Data Available

Interacting Proteins for MIR1295A Gene

Gene Ontology (GO) - Biological Process for MIR1295A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1295A Gene

Drugs & Compounds for MIR1295A Gene

No Compound Related Data Available

Transcripts for MIR1295A Gene

mRNA/cDNA for MIR1295A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1295A Gene

No ASD Table

Relevant External Links for MIR1295A Gene

GeneLoc Exon Structure for
MIR1295A
ECgene alternative splicing isoforms for
MIR1295A

Expression for MIR1295A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1295A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1295A Gene:

MIR1295A
genes like me logo Genes that share expression patterns with MIR1295A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1295A Gene

Orthologs for MIR1295A Gene

Evolution for MIR1295A Gene

ENSEMBL:
Gene Tree for MIR1295A (if available)
TreeFam:
Gene Tree for MIR1295A (if available)

No data available for Orthologs for MIR1295A Gene

Paralogs for MIR1295A Gene

No data available for Paralogs for MIR1295A Gene

Variants for MIR1295A Gene

Sequence variations from dbSNP and Humsavar for MIR1295A Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs72549321 pathogenic, Trimethylaminuria 171,103,806(-) G/A upstream_transcript_variant
rs1000416328 -- 171,102,697(-) G/A upstream_transcript_variant
rs1001591579 -- 171,102,293(-) T/C upstream_transcript_variant
rs1003107481 -- 171,102,046(-) T/A upstream_transcript_variant
rs1005380006 -- 171,103,370(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1295A Gene

Variant ID Type Subtype PubMed ID
esv28731 CNV gain+loss 19812545

Additional Variant Information for MIR1295A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1295A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1295A Gene

Disorders for MIR1295A Gene

Additional Disease Information for MIR1295A

No disorders were found for MIR1295A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1295A Gene

Publications for MIR1295A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1295A Gene

Sources for MIR1295A Gene

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