Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR1295A Gene

Subcategory (RNA class) for MIR1295A Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1295A Gene

  • MicroRNA 1295a 2 3 5
  • MicroRNA 1295 2 3
  • Hsa-Mir-1295a 3
  • Hsa-Mir-1295 3
  • Mir-1295a 3
  • MIRN1295 3
  • MIR1295 3

External Ids for MIR1295A Gene

Previous HGNC Symbols for MIR1295A Gene

  • MIRN1295
  • MIR1295

Summaries for MIR1295A Gene

Entrez Gene Summary for MIR1295A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1295A Gene

MIR1295A (MicroRNA 1295a) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1295A Gene

Genomics for MIR1295A Gene

Regulatory Elements for MIR1295A Gene

Enhancers for MIR1295A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F171138 1.4 FANTOM5 Ensembl ENCODE 10.9 -39.5 -39519 5.4 INSM2 FEZF1 THRB ZSCAN9 RAD21 YY1 ZNF362 OVOL3 CEBPB TSHZ1 FMO3 MIR1295A FMO6P FMO2
GH01F171157 1 Ensembl ENCODE 10.9 -58.4 -58357 4.9 GATAD2A TEAD1 HLF CEBPB CEBPG ZNF644 RAD21 RARA TEAD3 YY1 FMO3 MIR1295A FMO2 ENSG00000231424 FMO6P
GH01F171126 0.2 ENCODE 11.7 -25.7 -25744 1.6 FMO3 MIR1295A FMO6P
GH01F171113 0.4 ENCODE 0.4 -11.9 -11889 1.4 YY1 FMO3 ENSG00000231424 MIR1295A FMO6P
GH01F171110 0.2 ENCODE 0.4 -9.3 -9343 1.5 FMO6P FMO3 MIR1295A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1295A on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1295A Gene

Chromosome:
1
Start:
171,101,728 bp from pter
End:
171,101,806 bp from pter
Size:
79 bases
Orientation:
Minus strand

Genomic View for MIR1295A Gene

Genes around MIR1295A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1295A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1295A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1295A Gene

ORGUL Member Location for MIR1295A Gene

ORGUL Member Location for MIR1295A gene

Proteins for MIR1295A Gene

Post-translational modifications for MIR1295A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1295A Gene

Domains & Families for MIR1295A Gene

Gene Families for MIR1295A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1295A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1295A Gene

Function for MIR1295A Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1295A Gene

Localization for MIR1295A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1295A Gene

Pathways & Interactions for MIR1295A Gene

SuperPathways for MIR1295A Gene

No Data Available

Interacting Proteins for MIR1295A Gene

Gene Ontology (GO) - Biological Process for MIR1295A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1295A Gene

Transcripts for MIR1295A Gene

mRNA/cDNA for MIR1295A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1295A Gene

No ASD Table

Relevant External Links for MIR1295A Gene

GeneLoc Exon Structure for
MIR1295A
ECgene alternative splicing isoforms for
MIR1295A

Expression for MIR1295A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1295A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1295A Gene:

MIR1295A
genes like me logo Genes that share expression patterns with MIR1295A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1295A Gene

Orthologs for MIR1295A Gene

Evolution for MIR1295A Gene

ENSEMBL:
Gene Tree for MIR1295A (if available)
TreeFam:
Gene Tree for MIR1295A (if available)

No data available for Orthologs for MIR1295A Gene

Paralogs for MIR1295A Gene

No data available for Paralogs for MIR1295A Gene

Variants for MIR1295A Gene

Sequence variations from dbSNP and Humsavar for MIR1295A Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs72549321 Pathogenic 171,103,806(+) GCAGG(A/G)CTAGC intron-variant, upstream-variant-2KB, reference, missense
rs10911192 -- 171,102,742(+) CCTAA(A/C)CTTCT intron-variant, upstream-variant-2KB
rs10911238 -- 171,103,467(+) GATTT(A/T)AAAAA intron-variant, upstream-variant-2KB
rs112375064 -- 171,103,712(+) ATTAC(C/T)TGGAA intron-variant, upstream-variant-2KB
rs112837244 -- 171,103,443(+) CATCC(-/AC)AGATT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1295A Gene

Variant ID Type Subtype PubMed ID
esv28731 CNV gain+loss 19812545

Relevant External Links for MIR1295A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1295A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1295A Gene

Disorders for MIR1295A Gene

Relevant External Links for MIR1295A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1295A

No disorders were found for MIR1295A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1295A Gene

Publications for MIR1295A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1295A Gene

Sources for MIR1295A Gene

Content
Loading form....