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Aliases for MIR128-2 Gene

Subcategory (RNA class) for MIR128-2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR128-2 Gene

  • MicroRNA 128-2 2 3 5
  • MicroRNA 128b 2 3
  • Hsa-Mir-128-2 3
  • Hsa-Mir-128b 3
  • Mir-128-2 3
  • MIRN128-2 3
  • Mir-128b 3
  • MIRN128B 3
  • MIR128B 3

External Ids for MIR128-2 Gene

ORGUL Members for MIR128-2 Gene

Previous HGNC Symbols for MIR128-2 Gene

  • MIRN128B
  • MIRN128-2

Previous GeneCards Identifiers for MIR128-2 Gene

  • GC03P035764
  • GC03P035787
  • GC03P035790
  • GC03P035746
  • GC03P035747
  • GC03P035748
  • GC03P035749

Summaries for MIR128-2 Gene

Entrez Gene Summary for MIR128-2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR128-2 Gene

MIR128-2 (MicroRNA 128-2) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Parkinsons Disease Pathway and MicroRNAs in cancer.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR128-2 Gene

Genomics for MIR128-2 Gene

Regulatory Elements for MIR128-2 Gene

Enhancers for MIR128-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F035492 0.2 ENCODE 10.7 -251.5 -251501 1.1 MIR128-2 GC03P035521 LOC101928135
GH03F035676 0.7 ENCODE 10.3 -65.6 -65618 3.8 SMARCA4 POLR2A ARPP21 ARPP21-AS1 MIR128-2 GC03P035745
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR128-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR128-2 Gene

Chromosome:
3
Start:
35,744,476 bp from pter
End:
35,744,559 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for MIR128-2 Gene

Genes around MIR128-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR128-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR128-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR128-2 Gene

Proteins for MIR128-2 Gene

Post-translational modifications for MIR128-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR128-2 Gene

Domains & Families for MIR128-2 Gene

Gene Families for MIR128-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR128-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR128-2 Gene

Function for MIR128-2 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR128-2 Gene

Localization for MIR128-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR128-2 Gene

Pathways & Interactions for MIR128-2 Gene

genes like me logo Genes that share pathways with MIR128-2: view

Pathways by source for MIR128-2 Gene

1 BioSystems pathway for MIR128-2 Gene
1 KEGG pathway for MIR128-2 Gene

Interacting Proteins for MIR128-2 Gene

Gene Ontology (GO) - Biological Process for MIR128-2 Gene

None

No data available for SIGNOR curated interactions for MIR128-2 Gene

Transcripts for MIR128-2 Gene

mRNA/cDNA for MIR128-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR128-2 Gene

No ASD Table

Relevant External Links for MIR128-2 Gene

GeneLoc Exon Structure for
MIR128-2
ECgene alternative splicing isoforms for
MIR128-2

Expression for MIR128-2 Gene

mRNA expression in normal human tissues for MIR128-2 Gene

genes like me logo Genes that share expression patterns with MIR128-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR128-2 Gene

Orthologs for MIR128-2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR128-2 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia cfa-mir-128-2 35
  • 100 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-128-2 35
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir128-2 35
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-128-2 35
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-128a 35
  • 92 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-128-2 35
  • 67 (a)
OneToOne
chicken
(Gallus gallus)
Aves gga-mir-128-2 35
  • 92 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia aca-mir-128-1 35
  • 84 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii dre-mir-128-2 35
  • 48 (a)
OneToOne
Species where no ortholog for MIR128-2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR128-2 Gene

ENSEMBL:
Gene Tree for MIR128-2 (if available)
TreeFam:
Gene Tree for MIR128-2 (if available)

Paralogs for MIR128-2 Gene

No data available for Paralogs for MIR128-2 Gene

Variants for MIR128-2 Gene

Sequence variations from dbSNP and Humsavar for MIR128-2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs11275533 -- 35,743,565(+) CAAGT(-/CTTCTTTAGGATCAGA)CTTGA intron-variant, upstream-variant-2KB
rs11712442 -- 35,743,714(+) GGCAT(C/G)GGAGA intron-variant, upstream-variant-2KB
rs13094224 -- 35,743,089(+) TTTGA(A/G)TAGTG intron-variant, upstream-variant-2KB
rs139316159 -- 35,744,266(+) ACCTT(A/C)TTTTA intron-variant, upstream-variant-2KB
rs139862817 -- 35,743,885(+) AACCA(C/T)GCAAC upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MIR128-2 Gene

Variant ID Type Subtype PubMed ID
nsv526191 CNV loss 19592680
nsv590055 CNV gain 21841781

Relevant External Links for MIR128-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR128-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR128-2 Gene

Disorders for MIR128-2 Gene

Relevant External Links for MIR128-2

Genetic Association Database (GAD)
MIR128-2
Human Genome Epidemiology (HuGE) Navigator
MIR128-2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR128-2

No disorders were found for MIR128-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR128-2 Gene

Publications for MIR128-2 Gene

  1. Novel genetic variants in microRNA genes and familial breast cancer. (PMID: 19048628) Shen J. … Zhao H. (Int. J. Cancer 2009) 3 46 64
  2. MiR-128b is down-regulated in gastric cancer and negatively regulates tumour cell viability by targeting PDK1/Akt/NF-I_B axis. (PMID: 26949090) Zhang L. … Xiong J.P. (J. Biosci. 2016) 3 64
  3. Serum miR-128-2 serves as a prognostic marker for patients with hepatocellular carcinoma. (PMID: 25642945) Zhuang L. … Meng Z. (PLoS ONE 2015) 3 64
  4. Suppression of CYP2C9 by microRNA hsa-miR-128-3p in human liver cells and association with hepatocellular carcinoma. (PMID: 25704921) Yu D. … Ning B. (Sci Rep 2015) 3 64
  5. Functions of MiRNA-128 on the regulation of head and neck squamous cell carcinoma growth and apoptosis. (PMID: 25764126) Hauser B. … Gu X. (PLoS ONE 2015) 3 64

Products for MIR128-2 Gene

Sources for MIR128-2 Gene

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