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Aliases for MIR1279 Gene

Subcategory (RNA class) for MIR1279 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1279 Gene

  • MicroRNA 1279 2 3 5
  • Hsa-Mir-1279 3
  • MIRN1279 3

External Ids for MIR1279 Gene

Previous HGNC Symbols for MIR1279 Gene

  • MIRN1279

Previous GeneCards Identifiers for MIR1279 Gene

  • GC00U922925
  • GC12M067953
  • GC12M069666
  • GC12M066716

Summaries for MIR1279 Gene

Entrez Gene Summary for MIR1279 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1279 Gene

MIR1279 (MicroRNA 1279) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR1279 include Pericardium Disease.

Additional gene information for MIR1279 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1279 Gene

Genomics for MIR1279 Gene

Genomic Location for MIR1279 Gene

Chromosome:
12
Start:
69,273,157 bp from pter
End:
69,273,218 bp from pter
Size:
62 bases
Orientation:
Minus strand

Genomic View for MIR1279 Gene

Genes around MIR1279 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1279 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1279 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1279 Gene

ORGUL Member Location for MIR1279 Gene

ORGUL Member Location for MIR1279 gene

No data available for Regulatory Elements for MIR1279 Gene

Proteins for MIR1279 Gene

Post-translational modifications for MIR1279 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1279 Gene

Domains & Families for MIR1279 Gene

Gene Families for MIR1279 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1279: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1279 Gene

Function for MIR1279 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR1279
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1279 Gene

Localization for MIR1279 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1279 Gene

Pathways & Interactions for MIR1279 Gene

SuperPathways for MIR1279 Gene

No Data Available

Interacting Proteins for MIR1279 Gene

Gene Ontology (GO) - Biological Process for MIR1279 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1279 Gene

Drugs & Compounds for MIR1279 Gene

No Compound Related Data Available

Transcripts for MIR1279 Gene

mRNA/cDNA for MIR1279 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR1279
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1279 Gene

No ASD Table

Relevant External Links for MIR1279 Gene

GeneLoc Exon Structure for
MIR1279
ECgene alternative splicing isoforms for
MIR1279

Expression for MIR1279 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1279 Gene:

MIR1279
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1279 Gene

Orthologs for MIR1279 Gene

Evolution for MIR1279 Gene

ENSEMBL:
Gene Tree for MIR1279 (if available)
TreeFam:
Gene Tree for MIR1279 (if available)

No data available for Orthologs for MIR1279 Gene

Paralogs for MIR1279 Gene

No data available for Paralogs for MIR1279 Gene

Variants for MIR1279 Gene

Sequence variations from dbSNP and Humsavar for MIR1279 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000758668 -- 69,274,105(+) TCTAA(G/T)AGACT upstream-variant-2KB, utr-variant-3-prime
rs1001231863 -- 69,274,460(+) AAATT(A/G)GACTG intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1001457904 -- 69,274,206(+) TTGCA(A/G)TTTTG upstream-variant-2KB, utr-variant-3-prime
rs1001509975 -- 69,274,488(+) TTAAG(A/C)CAGAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1002501009 -- 69,272,871(+) TACAG(A/T)GTGTG downstream-variant-500B, utr-variant-3-prime

Relevant External Links for MIR1279 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1279

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR1279 Gene

Disorders for MIR1279 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR1279 Gene - From: DISEASES

Disorder Aliases PubMed IDs
pericardium disease
  • abnormality of the pericardium
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for MIR1279

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1279
genes like me logo Genes that share disorders with MIR1279: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR1279 Gene

Publications for MIR1279 Gene

  1. miR-1279, miR-548j, miR-548m, and miR-548d-5p binding sites in CDSs of paralogous and orthologous PTPN12, MSH6, and ZEB1 Genes. (PMID: 23957009) Ivashchenko AT … Berillo OA (BioMed research international 2013) 3 60
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR1279 Gene

Sources for MIR1279 Gene

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