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Aliases for MIR1276 Gene

Subcategory (RNA class) for MIR1276 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1276 Gene

  • MicroRNA 1276 2 3 5
  • Hsa-Mir-1276 3
  • Mir-1276 3
  • MIRN1276 3

External Ids for MIR1276 Gene

Previous HGNC Symbols for MIR1276 Gene

  • MIRN1276

Previous GeneCards Identifiers for MIR1276 Gene

  • GC00U922974
  • GC15M084115
  • GC15M086313
  • GC15M085772
  • GC15M085792
  • GC15M085810
  • GC15M085817

Summaries for MIR1276 Gene

Entrez Gene Summary for MIR1276 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1276 Gene

MIR1276 (MicroRNA 1276) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1276 Gene

Genomics for MIR1276 Gene

Regulatory Elements for MIR1276 Gene

Enhancers for MIR1276 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F085836 1.5 Ensembl ENCODE 11.2 -68.1 -68131 4.6 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 ZNF121 SLC30A9 KLHL25 MIR1276 LOC105370952 ENSG00000259608
GH15F085831 0.7 Ensembl ENCODE 10.8 -61.2 -61223 0.4 CTCF CBX1 ZNF654 SMARCA4 ARID4B SMC3 RAD21 KLHL25 MIR1276 LOC105370952 MIR548AP
GH15F085832 0.4 Ensembl 10.8 -61.9 -61923 0.7 KLHL25 MIR1276 LOC105370952 MIR548AP
GH15F085763 0.8 Ensembl ENCODE 0.4 +6.4 6368 1.0 SCRT2 CUX1 KLHL25 ENSG00000259407 LOC101929679 MIR1276
GH15F085761 0.4 ENCODE 0.4 +8.4 8386 1.5 KLHL25 ENSG00000259407 LOC101929679 MIR1276
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR1276 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1276 Gene

Chromosome:
15
Start:
85,770,496 bp from pter
End:
85,770,578 bp from pter
Size:
83 bases
Orientation:
Minus strand

Genomic View for MIR1276 Gene

Genes around MIR1276 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1276 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1276 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1276 Gene

Proteins for MIR1276 Gene

Post-translational modifications for MIR1276 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1276 Gene

Domains & Families for MIR1276 Gene

Gene Families for MIR1276 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1276: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1276 Gene

Function for MIR1276 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1276 Gene

Localization for MIR1276 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1276 Gene

Pathways & Interactions for MIR1276 Gene

SuperPathways for MIR1276 Gene

No Data Available

Interacting Proteins for MIR1276 Gene

Gene Ontology (GO) - Biological Process for MIR1276 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1276 Gene

Transcripts for MIR1276 Gene

mRNA/cDNA for MIR1276 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1276 Gene

No ASD Table

Relevant External Links for MIR1276 Gene

GeneLoc Exon Structure for
MIR1276
ECgene alternative splicing isoforms for
MIR1276

Expression for MIR1276 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1276 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1276 Gene:

MIR1276
genes like me logo Genes that share expression patterns with MIR1276: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1276 Gene

Orthologs for MIR1276 Gene

Evolution for MIR1276 Gene

ENSEMBL:
Gene Tree for MIR1276 (if available)
TreeFam:
Gene Tree for MIR1276 (if available)

No data available for Orthologs for MIR1276 Gene

Paralogs for MIR1276 Gene

No data available for Paralogs for MIR1276 Gene

Variants for MIR1276 Gene

Sequence variations from dbSNP and Humsavar for MIR1276 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs111978973 -- 85,771,571(+) CTTTT(C/G)GGCTT intron-variant, upstream-variant-2KB
rs114142902 -- 85,771,954(+) AGCTT(C/T)GCCAA intron-variant, upstream-variant-2KB
rs117490081 -- 85,771,754(+) TGGAC(A/G)CAGAT intron-variant, upstream-variant-2KB
rs142286996 -- 85,770,299(+) CCAAA(-/C)CTGCC intron-variant, downstream-variant-500B
rs142809296 -- 85,770,460(+) CAAGC(A/G)GTACT intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR1276 Gene

Variant ID Type Subtype PubMed ID
dgv2649n100 CNV gain 25217958
dgv2650n100 CNV gain 25217958
nsv516322 CNV loss 19592680

Relevant External Links for MIR1276 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1276

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1276 Gene

Disorders for MIR1276 Gene

Relevant External Links for MIR1276

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1276

No disorders were found for MIR1276 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1276 Gene

Publications for MIR1276 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1276 Gene

Sources for MIR1276 Gene

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