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Aliases for MIR1276 Gene

Subcategory (RNA class) for MIR1276 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1276 Gene

  • MicroRNA 1276 2 3 5
  • Hsa-Mir-1276 3
  • Mir-1276 3
  • MIRN1276 3

External Ids for MIR1276 Gene

Previous HGNC Symbols for MIR1276 Gene

  • MIRN1276

Previous GeneCards Identifiers for MIR1276 Gene

  • GC00U922974
  • GC15M084115
  • GC15M086313
  • GC15M085772
  • GC15M085792
  • GC15M085810
  • GC15M085817
  • GC15M085827
  • GC15M085832
  • GC15M085837

Summaries for MIR1276 Gene

Entrez Gene Summary for MIR1276 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1276 Gene

MIR1276 (MicroRNA 1276) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1276 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1276 Gene

Genomics for MIR1276 Gene

GeneHancer (GH) Regulatory Elements for MIR1276 Gene

Promoters and enhancers for MIR1276 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I085771 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.8 -1847 2 RXRA MAX REST NR2F2 YY1 JUND ATF3 HNF4A ZBTB33 ENSG00000259195 MIR1276 ENSG00000259276 LOC101929679 ENSG00000259407 KLHL25 GC15M085845
GH15I085770 Enhancer 0.8 ENCODE dbSUPER 550.8 -0.4 -376 0.4 RXRA MAX REST RAD21 FOXA1 YY1 JUND ATF3 HNF4G HNF4A ENSG00000259195 MIR1276 KLHL25 GC15M085845
GH15I085768 Enhancer 0.6 dbSUPER 550.8 +0.9 923 2.2 RXRA MAX MAFG REST FOXA1 YY1 JUND ATF3 HNF4G NFE2 ENSG00000259195 MIR1276 ENSG00000259276 KLHL25 LOC101929679 ENSG00000259407 GC15M085845
GH15I085836 Enhancer 1.2 Ensembl ENCODE 11.2 -68.1 -68130 4.6 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 LOC105370952 KLHL25 MIR1276 ENSG00000259608
GH15I085709 Enhancer 0.8 dbSUPER 11.1 +58.3 58267 5 HDGF PKNOX1 SMAD1 BMI1 BATF IRF4 ZNF143 ATF7 ETV6 BCLAF1 ENSG00000259276 MIR1276 RNU6-1280P ENSG00000259762 ENSG00000259407 KLHL25 AKAP13 ENSG00000259544 ENSG00000259453
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1276 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1276 Gene

Genomic Locations for MIR1276 Gene
chr15:85,770,496-85,770,578
(GRCh38/hg38)
Size:
83 bases
Orientation:
Minus strand
chr15:86,313,727-86,313,809
(GRCh37/hg19)

Genomic View for MIR1276 Gene

Genes around MIR1276 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1276 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1276 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1276 Gene

Proteins for MIR1276 Gene

Post-translational modifications for MIR1276 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1276 Gene

Domains & Families for MIR1276 Gene

Gene Families for MIR1276 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1276: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1276 Gene

Function for MIR1276 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1276 Gene

Localization for MIR1276 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1276 Gene

Pathways & Interactions for MIR1276 Gene

SuperPathways for MIR1276 Gene

No Data Available

Interacting Proteins for MIR1276 Gene

Gene Ontology (GO) - Biological Process for MIR1276 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1276 Gene

Drugs & Compounds for MIR1276 Gene

No Compound Related Data Available

Transcripts for MIR1276 Gene

mRNA/cDNA for MIR1276 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1276 Gene

No ASD Table

Relevant External Links for MIR1276 Gene

GeneLoc Exon Structure for
MIR1276
ECgene alternative splicing isoforms for
MIR1276

Expression for MIR1276 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1276 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1276 Gene:

MIR1276
genes like me logo Genes that share expression patterns with MIR1276: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1276 Gene

Orthologs for MIR1276 Gene

Evolution for MIR1276 Gene

ENSEMBL:
Gene Tree for MIR1276 (if available)
TreeFam:
Gene Tree for MIR1276 (if available)

No data available for Orthologs for MIR1276 Gene

Paralogs for MIR1276 Gene

No data available for Paralogs for MIR1276 Gene

Variants for MIR1276 Gene

Sequence variations from dbSNP and Humsavar for MIR1276 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000076838 -- 85,770,869(-) T/A upstream_transcript_variant
rs1001312437 -- 85,771,495(-) T/C upstream_transcript_variant
rs1001342148 -- 85,771,632(-) G/C upstream_transcript_variant
rs1001703992 -- 85,771,184(-) T/A upstream_transcript_variant
rs1002365454 -- 85,770,346(-) G/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1276 Gene

Variant ID Type Subtype PubMed ID
dgv2649n100 CNV gain 25217958
dgv2650n100 CNV gain 25217958
nsv516322 CNV loss 19592680

Additional Variant Information for MIR1276 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1276

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1276 Gene

Disorders for MIR1276 Gene

Additional Disease Information for MIR1276

No disorders were found for MIR1276 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1276 Gene

Publications for MIR1276 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1276 Gene

Sources for MIR1276 Gene

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