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Aliases for MIR1273C Gene

Subcategory (RNA class) for MIR1273C Gene


Quality Score for this RNA gene is


Aliases for MIR1273C Gene

  • MicroRNA 1273c 2 3 5
  • Hsa-Mir-1273c 3

External Ids for MIR1273C Gene

Previous GeneCards Identifiers for MIR1273C Gene

  • GC06U902043
  • GC06P155174

Summaries for MIR1273C Gene

Entrez Gene Summary for MIR1273C Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1273C Gene

MIR1273C (MicroRNA 1273c) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1273C Gene

Genomics for MIR1273C Gene

Regulatory Elements for MIR1273C Gene

Enhancers for MIR1273C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F154852 0.9 ENCODE 0.8 -0.5 -529 0.1 INSM2 KLF17 FEZF1 ZNF2 ZEB1 ZNF302 ZNF366 SCRT2 ZNF391 ZNF362 SCAF8 ENSG00000238963 MIR1273C ENSG00000218757
GH06F154860 0.7 FANTOM5 0.4 +7.0 6993 0.3 PKNOX1 MTA2 ZBED1 JUNB NBN TRIM22 BMI1 TBX21 ENSG00000238963 TIAM2 MIR1273C
GH06F154863 0.7 ENCODE 0.4 +10.5 10545 1.2 HDGF TFAP4 SAP130 ARID4B CEBPG TEAD3 SLC30A9 ZFHX2 HOMEZ MIXL1 ENSG00000238963 SCAF8 MIR1273C
GH06F154874 0.7 ENCODE 0.3 +21.9 21894 1.1 SCRT1 CTCF TEAD1 CEBPG PPARG EP300 ZNF843 TEAD3 CTBP1 SCRT2 ENSG00000238963 MIR1273C
GH06F154891 0.6 ENCODE 0.3 +38.8 38817 1.5 ELF3 ZNF680 SCRT2 ZFP64 PRDM1 HOMEZ ENSG00000238963 MIR1273C
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1273C on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1273C Gene

154,853,360 bp from pter
154,853,436 bp from pter
77 bases
Plus strand

Genomic View for MIR1273C Gene

Genes around MIR1273C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1273C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1273C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1273C Gene

Proteins for MIR1273C Gene

Post-translational modifications for MIR1273C Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1273C Gene

Domains & Families for MIR1273C Gene

Gene Families for MIR1273C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1273C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1273C Gene

Function for MIR1273C Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1273C Gene

Localization for MIR1273C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1273C Gene

Pathways & Interactions for MIR1273C Gene

SuperPathways for MIR1273C Gene

No Data Available

Interacting Proteins for MIR1273C Gene

Gene Ontology (GO) - Biological Process for MIR1273C Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1273C Gene

Transcripts for MIR1273C Gene

mRNA/cDNA for MIR1273C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1273C Gene

No ASD Table

Relevant External Links for MIR1273C Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1273C Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1273C Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1273C Gene:

genes like me logo Genes that share expression patterns with MIR1273C: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1273C Gene

Orthologs for MIR1273C Gene

Evolution for MIR1273C Gene

Gene Tree for MIR1273C (if available)
Gene Tree for MIR1273C (if available)

No data available for Orthologs for MIR1273C Gene

Paralogs for MIR1273C Gene

No data available for Paralogs for MIR1273C Gene

Variants for MIR1273C Gene

Sequence variations from dbSNP and Humsavar for MIR1273C Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs111252952 -- 154,853,390(+) CTGTC(-/T)TTTTT nc-transcript-variant
rs112184644 -- 154,852,800(+) CTCAT(C/G)ATGAC upstream-variant-2KB
rs113769920 -- 154,852,176(+) ATTCT(C/T)CTGCC upstream-variant-2KB
rs137941960 -- 154,853,677(+) CAAAA(C/T)AAAAC downstream-variant-500B
rs139785339 -- 154,851,433(+) GGTCT(A/G)TTTAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1273C Gene

Variant ID Type Subtype PubMed ID
esv3611331 CNV loss 21293372
nsv5551 CNV deletion 18451855

Relevant External Links for MIR1273C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1273C Gene

Disorders for MIR1273C Gene

Relevant External Links for MIR1273C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1273C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1273C Gene

Publications for MIR1273C Gene

  1. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3 64
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1273C Gene

Sources for MIR1273C Gene

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