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Aliases for MIR1272 Gene

Subcategory (RNA class) for MIR1272 Gene


Quality Score for this RNA gene is


Aliases for MIR1272 Gene

  • MicroRNA 1272 2 3 5
  • Hsa-Mir-1272 3
  • Mir-1272 3
  • MIRN1272 3

External Ids for MIR1272 Gene

Previous HGNC Symbols for MIR1272 Gene

  • MIRN1272

Previous GeneCards Identifiers for MIR1272 Gene

  • GC00U922969
  • GC15M062842
  • GC15M065054

Summaries for MIR1272 Gene

Entrez Gene Summary for MIR1272 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1272 Gene

MIR1272 (MicroRNA 1272) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1272 Gene

Genomics for MIR1272 Gene

Regulatory Elements for MIR1272 Gene

Enhancers for MIR1272 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F064730 1.2 Ensembl ENCODE 11.8 +30.5 30540 2.0 ELF3 PKNOX1 SREBF2 ARID4B THRB ZNF48 ZSCAN9 BRCA1 RAD21 ZEB1 TRIP4 MIR1272 RBPMS2 RNU6-549P ENSG00000249240 PLEKHO2 PIF1 SNX1 OAZ2
GH15F064801 1 Ensembl ENCODE 12.4 -39.8 -39795 1.5 ATF1 PKNOX1 CEBPG RARA ZNF121 CREM GATAD2A PAF1 NFIA HLF RBPMS2 TRIP4 PIF1 MIR1272
GH15F065053 1.2 Ensembl ENCODE 9.6 -292.7 -292664 2.4 ELF3 PKNOX1 ARID4B SIN3A ZNF48 ZSCAN9 RAD21 YY1 SCRT2 ZNF143 UBAP1L SPG21 MTFMT KBTBD13 RASL12 RNU5B-1 RBPMS2 MIR1272 ENSG00000277351 PIR51727
GH15F064610 1.2 Ensembl ENCODE 9.3 +151.5 151454 1.1 ELF3 PKNOX1 ARID4B DMAP1 ZSCAN9 RAD21 RARA CREM MIXL1 THAP11 RBPMS2 TRIP4 RNU6-549P ENSG00000252774 MIR1272 RPS26P50 RPL21P15
GH15F064716 1 Ensembl ENCODE 10.9 +44.5 44526 2.8 CTCF BACH1 MAFG REST RAD21 ZNF316 ZFHX2 HNF1A ZBTB33 FOXP2 TRIP4 RBPMS2 RNU6-549P MIR1272 ENSG00000249240 PLEKHO2 OAZ2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1272 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1272 Gene

64,762,387 bp from pter
64,762,515 bp from pter
129 bases
Minus strand

Genomic View for MIR1272 Gene

Genes around MIR1272 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1272 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1272 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1272 Gene

ORGUL Member Location for MIR1272 Gene

ORGUL Member Location for MIR1272 gene

Proteins for MIR1272 Gene

Post-translational modifications for MIR1272 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1272 Gene

Domains & Families for MIR1272 Gene

Gene Families for MIR1272 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1272: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1272 Gene

Function for MIR1272 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1272 Gene

Localization for MIR1272 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1272 Gene

Pathways & Interactions for MIR1272 Gene

SuperPathways for MIR1272 Gene

No Data Available

Interacting Proteins for MIR1272 Gene

Gene Ontology (GO) - Biological Process for MIR1272 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1272 Gene

Transcripts for MIR1272 Gene

mRNA/cDNA for MIR1272 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1272 Gene

No ASD Table

Relevant External Links for MIR1272 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1272 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1272 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1272 Gene:

genes like me logo Genes that share expression patterns with MIR1272: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1272 Gene

Orthologs for MIR1272 Gene

Evolution for MIR1272 Gene

Gene Tree for MIR1272 (if available)
Gene Tree for MIR1272 (if available)

No data available for Orthologs for MIR1272 Gene

Paralogs for MIR1272 Gene

No data available for Paralogs for MIR1272 Gene

Variants for MIR1272 Gene

Sequence variations from dbSNP and Humsavar for MIR1272 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs10851739 -- 64,763,844(+) ACTAA(A/G)CCAGG intron-variant, upstream-variant-2KB
rs113283252 -- 64,763,625(+) TCATA(G/T)TCCTT intron-variant, upstream-variant-2KB
rs113749826 -- 64,761,935(+) AAACT(C/G)CTGAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs114965408 -- 64,762,469(+) AGCAC(A/G)TTTTC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs115219641 -- 64,762,811(+) AAGAC(C/T)CAGCC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1272 Gene

Variant ID Type Subtype PubMed ID
nsv569703 CNV loss 21841781
nsv528510 CNV loss 19592680
dgv31n68 CNV loss 17160897

Relevant External Links for MIR1272 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1272 Gene

Disorders for MIR1272 Gene

Relevant External Links for MIR1272

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1272 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1272 Gene

Publications for MIR1272 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1272 Gene

Sources for MIR1272 Gene

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