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Aliases for MIR1255B1 Gene

Subcategory (RNA class) for MIR1255B1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1255B1 Gene

  • MicroRNA 1255b-1 2 3 5
  • Hsa-Mir-1255b-1 3
  • MIR1255B-1 3
  • MIRN1255B1 3

External Ids for MIR1255B1 Gene

Previous HGNC Symbols for MIR1255B1 Gene

  • MIRN1255B1

Previous GeneCards Identifiers for MIR1255B1 Gene

  • GC00U923080
  • GC04M036104

Summaries for MIR1255B1 Gene

Entrez Gene Summary for MIR1255B1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1255B1 Gene

MIR1255B1 (MicroRNA 1255b-1) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1255B1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1255B1 Gene

Genomics for MIR1255B1 Gene

GeneHancer (GH) Regulatory Elements for MIR1255B1 Gene

Promoters and enhancers for MIR1255B1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I036399 Enhancer 0.6 ENCODE 0.3 +26.5 26474 0.2 CTCF ZNF654 RB1 TRIM22 RAD21 HNF4G ZNF143 SMC3 HNF4A ARAP2 LOC439933 ENSG00000251438 MIR1255B1
GH04I036394 Enhancer 0.6 ENCODE 0.3 +31.7 31714 0.2 NR2F1 JUNB DPF2 ATF2 JUND IKZF1 CREB1 FOS ETV6 ENSG00000251438 MIR1255B1
GH04I036493 Enhancer 0.3 FANTOM5 0.2 -67.3 -67251 0 ATF2 LOC100130532 MIR1255B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1255B1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1255B1 Gene

Genomic Locations for MIR1255B1 Gene
chr4:36,426,366-36,426,428
(GRCh38/hg38)
Size:
63 bases
Orientation:
Minus strand
chr4:36,427,988-36,428,050
(GRCh37/hg19)

Genomic View for MIR1255B1 Gene

Genes around MIR1255B1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1255B1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1255B1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1255B1 Gene

ORGUL Member Location for MIR1255B1 Gene

ORGUL Member Location for MIR1255B1 gene

Proteins for MIR1255B1 Gene

Post-translational modifications for MIR1255B1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1255B1 Gene

Domains & Families for MIR1255B1 Gene

Gene Families for MIR1255B1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1255B1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1255B1 Gene

Function for MIR1255B1 Gene

Phenotypes From GWAS Catalog for MIR1255B1 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1255B1 Gene

Localization for MIR1255B1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1255B1 Gene

Pathways & Interactions for MIR1255B1 Gene

SuperPathways for MIR1255B1 Gene

No Data Available

Interacting Proteins for MIR1255B1 Gene

Gene Ontology (GO) - Biological Process for MIR1255B1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1255B1 Gene

Drugs & Compounds for MIR1255B1 Gene

No Compound Related Data Available

Transcripts for MIR1255B1 Gene

mRNA/cDNA for MIR1255B1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1255B1 Gene

No ASD Table

Relevant External Links for MIR1255B1 Gene

GeneLoc Exon Structure for
MIR1255B1
ECgene alternative splicing isoforms for
MIR1255B1

Expression for MIR1255B1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1255B1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1255B1 Gene:

MIR1255B1
genes like me logo Genes that share expression patterns with MIR1255B1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1255B1 Gene

Orthologs for MIR1255B1 Gene

Evolution for MIR1255B1 Gene

ENSEMBL:
Gene Tree for MIR1255B1 (if available)
TreeFam:
Gene Tree for MIR1255B1 (if available)

No data available for Orthologs for MIR1255B1 Gene

Paralogs for MIR1255B1 Gene

No data available for Paralogs for MIR1255B1 Gene

Variants for MIR1255B1 Gene

Sequence variations from dbSNP and Humsavar for MIR1255B1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1001116107 -- 36,427,896(-) T/A upstream_transcript_variant
rs1001155646 -- 36,428,173(-) C/A upstream_transcript_variant
rs1001157252 -- 36,427,948(-) G/C upstream_transcript_variant
rs1002832278 -- 36,426,542(-) T/C upstream_transcript_variant
rs1004298999 -- 36,427,882(-) A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1255B1 Gene

Variant ID Type Subtype PubMed ID
esv3600217 CNV loss 21293372

Additional Variant Information for MIR1255B1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1255B1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1255B1 Gene

Disorders for MIR1255B1 Gene

Additional Disease Information for MIR1255B1

No disorders were found for MIR1255B1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1255B1 Gene

Publications for MIR1255B1 Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1255B1 Gene

Sources for MIR1255B1 Gene

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