Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR1255A Gene

Subcategory (RNA class) for MIR1255A Gene


Quality Score for this RNA gene is


Aliases for MIR1255A Gene

  • MicroRNA 1255a 2 3 5
  • Hsa-Mir-1255a 3
  • MIRN1255A 3

External Ids for MIR1255A Gene

Previous HGNC Symbols for MIR1255A Gene

  • MIRN1255A

Previous GeneCards Identifiers for MIR1255A Gene

  • GC00U923007
  • GC04M102471
  • GC04M102251

Summaries for MIR1255A Gene

Entrez Gene Summary for MIR1255A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1255A Gene

MIR1255A (MicroRNA 1255a) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1255A Gene

Genomics for MIR1255A Gene

Regulatory Elements for MIR1255A Gene

Enhancers for MIR1255A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F101309 0.5 Ensembl 13.4 +20.2 20214 0.8 MTA2 MLLT1 FLJ20021 MIR1255A PPP3CA GC04M101296
GH04F101306 0.5 Ensembl 12.6 +23.6 23614 1.6 ZNF146 TBL1XR1 MTA2 FEZF1 TBX21 OSR2 ZFHX2 IKZF1 GLIS1 PRDM10 FLJ20021 MIR1255A PPP3CA GC04M101296
GH04F101282 0.9 Ensembl ENCODE 12.1 +43.4 43414 10.0 PKNOX1 MAX ZNF140 ZNF384 ETS1 GATA3 ZBTB48 SCRT2 ZSCAN29 HOMEZ FLJ20021 MIR1255A PPP3CA GC04M101296 MIR8066
GH04F101305 0.8 Ensembl 12 +25.2 25214 0.4 GFI1B OVOL3 FEZF1 ZEB2 ZNF843 RAD51 GATA3 GLIS1 PRDM10 ZNF600 FLJ20021 MIR1255A PPP3CA GC04M101296
GH04F101354 1.1 Ensembl ENCODE 11.5 -26.1 -26091 3.6 ELF3 PKNOX1 TBL1XR1 SIN3A BMI1 DMAP1 RARA RFX5 CBX5 FOS FLJ20021 MIR1255A PPP3CA BANK1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR1255A on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1255A Gene

101,330,302 bp from pter
101,330,414 bp from pter
113 bases
Minus strand

Genomic View for MIR1255A Gene

Genes around MIR1255A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1255A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1255A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1255A Gene

ORGUL Member Location for MIR1255A Gene

ORGUL Member Location for MIR1255A gene

Proteins for MIR1255A Gene

Post-translational modifications for MIR1255A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1255A Gene

Domains & Families for MIR1255A Gene

Gene Families for MIR1255A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1255A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1255A Gene

Function for MIR1255A Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1255A Gene

Localization for MIR1255A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1255A Gene

Pathways & Interactions for MIR1255A Gene

SuperPathways for MIR1255A Gene

No Data Available

Interacting Proteins for MIR1255A Gene

Gene Ontology (GO) - Biological Process for MIR1255A Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1255A Gene

Transcripts for MIR1255A Gene

mRNA/cDNA for MIR1255A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1255A Gene

No ASD Table

Relevant External Links for MIR1255A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1255A Gene

mRNA expression in normal human tissues for MIR1255A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1255A Gene:

genes like me logo Genes that share expression patterns with MIR1255A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1255A Gene

Orthologs for MIR1255A Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR1255A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 35
  • 92 (a)
Species where no ortholog for MIR1255A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR1255A Gene

Gene Tree for MIR1255A (if available)
Gene Tree for MIR1255A (if available)

Paralogs for MIR1255A Gene

No data available for Paralogs for MIR1255A Gene

Variants for MIR1255A Gene

Sequence variations from dbSNP and Humsavar for MIR1255A Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10549066 -- 101,330,958(+) GTTGT(-/GGG)CCTCA intron-variant, upstream-variant-2KB
rs111508803 -- 101,332,174(+) CACCA(C/T)ACCCA intron-variant, upstream-variant-2KB
rs112221253 -- 101,331,892(+) TCCTG(C/T)AAACC intron-variant, upstream-variant-2KB
rs112900085 -- 101,331,047(+) ACAGA(C/T)GTTCA intron-variant, upstream-variant-2KB
rs113331174 -- 101,330,670(+) AAACC(A/G)ACAAT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1255A Gene

Variant ID Type Subtype PubMed ID
nsv1011351 CNV gain 25217958
nsv950365 CNV duplication 24416366

Relevant External Links for MIR1255A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1255A Gene

Disorders for MIR1255A Gene

Relevant External Links for MIR1255A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1255A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1255A Gene

Publications for MIR1255A Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1255A Gene

Sources for MIR1255A Gene

Loading form....