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Aliases for MIR1247 Gene

Subcategory (RNA class) for MIR1247 Gene


Quality Score for this RNA gene is


Aliases for MIR1247 Gene

  • MicroRNA 1247 2 3
  • DIO3 Opposite Strand/Antisense RNA (Head To Head) 5
  • Hsa-Mir-1247 3
  • Mir-1247 3
  • MIRN1247 3
  • DIO3OS 5

External Ids for MIR1247 Gene

Previous HGNC Symbols for MIR1247 Gene

  • MIRN1247

Previous GeneCards Identifiers for MIR1247 Gene

  • GC00U923082
  • GC14M101097
  • GC14M102026

Summaries for MIR1247 Gene

Entrez Gene Summary for MIR1247 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1247 Gene

MIR1247 (MicroRNA 1247) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1247 Gene

Genomics for MIR1247 Gene

Regulatory Elements for MIR1247 Gene

Enhancers for MIR1247 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F101628 1.2 Ensembl ENCODE 10.7 -68.2 -68191 1.2 HDAC1 NFRKB THRB ZNF48 ZNF2 RAD21 RARA ZNF335 ZNF143 FOS DIO3 MIR1247 ENSG00000258919 LOC105370675
GH14F100769 1.3 FANTOM5 ENCODE 9.7 +784.8 784814 12.7 HDGF PKNOX1 CREB3L1 FOS KLF13 SP5 ZHX2 REST KAT8 MEF2D DLK1 MIR1247 DIO3 EVL MEG3 PIR41786
GH14F101235 0.8 Ensembl 9.4 +325.1 325130 0.6 ELF3 CTCF SAP130 ARID4B ZNF48 ZIC2 RAD21 ZBTB48 ZNF143 SMC3 MIR370 MEG3 MIR127 MIR136 MIR431 MIR433 RTL1 MIR337 MIR493 SNORD113-2
GH14F101405 0.7 ENCODE 10.4 +154.8 154793 0.3 CEBPB USF2 ZBTB40 RAD21 NR2F2 YY1 RAD51 ATF3 CEBPA HNF4G DIO3 MIR1247 ENSG00000222185 ENSG00000222095 SNORD114-31 MIR493 MIR127 MIR136 MIR431 MIR433
GH14F101004 0.8 Ensembl ENCODE 9 +555.2 555156 2.3 GATA3 MAX MNT ZIC2 MYC TCF7L2 MIR134 MIR487A MIR154 MIR323B MIR485 MIR377 MIR496 MIR376C MIR654 MIR1185-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1247 on UCSC Golden Path with GeneCards custom track

Promoters for MIR1247 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001792509 -269 601 CTCF CBX2 RAD21

Genomic Location for MIR1247 Gene

101,552,221 bp from pter
101,560,431 bp from pter
8,211 bases
Minus strand

Genomic View for MIR1247 Gene

Genes around MIR1247 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1247 Gene

Proteins for MIR1247 Gene

Post-translational modifications for MIR1247 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1247 Gene

Domains & Families for MIR1247 Gene

Gene Families for MIR1247 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1247: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1247 Gene

Function for MIR1247 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1247 Gene

Localization for MIR1247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1247 Gene

Pathways & Interactions for MIR1247 Gene

SuperPathways for MIR1247 Gene

No Data Available

Interacting Proteins for MIR1247 Gene

Gene Ontology (GO) - Biological Process for MIR1247 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1247 Gene

Transcripts for MIR1247 Gene

mRNA/cDNA for MIR1247 Gene

(13) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1247 Gene

No ASD Table

Relevant External Links for MIR1247 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1247 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1247 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1247 Gene

Orthologs for MIR1247 Gene

Evolution for MIR1247 Gene

Gene Tree for MIR1247 (if available)
Gene Tree for MIR1247 (if available)

No data available for Orthologs for MIR1247 Gene

Paralogs for MIR1247 Gene

No data available for Paralogs for MIR1247 Gene

Variants for MIR1247 Gene

Sequence variations from dbSNP and Humsavar for MIR1247 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs113665653 -- 101,560,150(+) TCAGA(A/G)GGTCT downstream-variant-500B, upstream-variant-2KB
rs12892309 -- 101,559,955(+) AGTGT(A/C)TCGGG downstream-variant-500B, upstream-variant-2KB
rs138578713 -- 101,561,661(+) GGCAC(C/G/T)GCCTT upstream-variant-2KB, reference, synonymous-codon
rs140242267 -- 101,562,420(+) TCCAA(C/T)GGACA upstream-variant-2KB, utr-variant-3-prime
rs143432605 -- 101,562,043(+) AGCGC(C/G)TGGTC upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MIR1247 Gene

Variant ID Type Subtype PubMed ID
nsv952247 CNV deletion 24416366
nsv827061 CNV gain 20364138
nsv827060 CNV gain 20364138
nsv565882 CNV loss 21841781
nsv565881 CNV gain+loss 21841781
nsv565880 CNV loss 21841781
nsv565879 CNV loss 21841781
nsv1047869 CNV gain 25217958
esv29376 CNV loss 19812545
dgv388n67 CNV gain 20364138
dgv1978n100 CNV gain 25217958

Relevant External Links for MIR1247 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1247 Gene

Disorders for MIR1247 Gene

Relevant External Links for MIR1247

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR1247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1247 Gene

Publications for MIR1247 Gene

  1. MiR-1247-5p is overexpressed in castration resistant prostate cancer and targets MYCBP2. (PMID: 25731699) Scaravilli M. … Visakorpi T. (Prostate 2015) 3 64
  2. MiRNA profile of osteosarcoma with CD117 and stro-1 expression: miR-1247 functions as an onco-miRNA by targeting MAP3K9. (PMID: 25973030) Zhao F. … Chen Y. (Int J Clin Exp Pathol 2015) 3 64
  3. Epigenetically regulated MIR941 and MIR1247 target gastric cancer cell growth and migration. (PMID: 24785261) Kim J.G. … Yi J.M. (Epigenetics 2014) 3 64
  4. miR-1247 functions by targeting cartilage transcription factor SOX9. (PMID: 24014021) Martinez-Sanchez A. … Murphy C.L. (J. Biol. Chem. 2013) 3 64
  5. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64

Products for MIR1247 Gene

Sources for MIR1247 Gene

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