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Aliases for MIR1244-3 Gene

Subcategory (RNA class) for MIR1244-3 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1244-3 Gene

  • MicroRNA 1244-3 2 3 5
  • Hsa-Mir-1244-3 3

External Ids for MIR1244-3 Gene

Previous GeneCards Identifiers for MIR1244-3 Gene

  • GC12U901498
  • GC12M009172
  • GC12P012265
  • GC12M009395

Summaries for MIR1244-3 Gene

Entrez Gene Summary for MIR1244-3 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1244-3 Gene

MIR1244-3 (MicroRNA 1244-3) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1244-3 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1244-3 Gene

Genomics for MIR1244-3 Gene

Regulatory Elements for MIR1244-3 Gene


Promoters for MIR1244-3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000048594 -849 801 RAD21 YY1

Genomic Location for MIR1244-3 Gene

Chromosome:
12
Start:
9,239,467 bp from pter
End:
9,239,551 bp from pter
Size:
85 bases
Orientation:
Minus strand

Genomic View for MIR1244-3 Gene

Genes around MIR1244-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1244-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1244-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1244-3 Gene

ORGUL Member Location for MIR1244-3 Gene

ORGUL Member Location for MIR1244-3 gene

Proteins for MIR1244-3 Gene

Post-translational modifications for MIR1244-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1244-3 Gene

Domains & Families for MIR1244-3 Gene

Gene Families for MIR1244-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1244-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1244-3 Gene

Function for MIR1244-3 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR1244-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1244-3 Gene

Localization for MIR1244-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1244-3 Gene

Pathways & Interactions for MIR1244-3 Gene

SuperPathways for MIR1244-3 Gene

No Data Available

Interacting Proteins for MIR1244-3 Gene

Gene Ontology (GO) - Biological Process for MIR1244-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1244-3 Gene

Drugs & Compounds for MIR1244-3 Gene

No Compound Related Data Available

Transcripts for MIR1244-3 Gene

mRNA/cDNA for MIR1244-3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR1244-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1244-3 Gene

No ASD Table

Relevant External Links for MIR1244-3 Gene

GeneLoc Exon Structure for
MIR1244-3
ECgene alternative splicing isoforms for
MIR1244-3

Expression for MIR1244-3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1244-3 Gene

genes like me logo Genes that share expression patterns with MIR1244-3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1244-3 Gene

Orthologs for MIR1244-3 Gene

Evolution for MIR1244-3 Gene

ENSEMBL:
Gene Tree for MIR1244-3 (if available)
TreeFam:
Gene Tree for MIR1244-3 (if available)

No data available for Orthologs for MIR1244-3 Gene

Paralogs for MIR1244-3 Gene

No data available for Paralogs for MIR1244-3 Gene

Variants for MIR1244-3 Gene

Sequence variations from dbSNP and Humsavar for MIR1244-3 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1002615702 -- 9,240,662(+) ACTTA(A/C)CTGAT intron-variant, upstream-variant-2KB
rs1003051787 -- 9,241,001(+) TTGTC(A/T)CACAC intron-variant, upstream-variant-2KB
rs1005088033 -- 9,238,983(+) TTAAG(C/T)AAAAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1005558941 -- 9,240,586(+) GCATG(-/C)CCCCA intron-variant, upstream-variant-2KB
rs1006089156 -- 9,240,236(+) GGGGC(A/G)TCTCT intron-variant, nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1244-3 Gene

Variant ID Type Subtype PubMed ID
esv2759117 CNV gain+loss 17122850
esv2759878 CNV gain+loss 17122850
esv3606474 CNV gain 21293372
esv3628601 CNV loss 21293372
esv3628602 CNV loss 21293372
nsv1017548 CNV loss 25217958
nsv1046355 CNV loss 25217958
nsv1051530 CNV gain 25217958
nsv1126310 CNV deletion 24896259
nsv3204 CNV deletion 18451855
nsv428408 CNV gain+loss 18775914
nsv523958 CNV loss 19592680
nsv527404 CNV gain 19592680
nsv528912 CNV loss 19592680
nsv529005 CNV loss 19592680
nsv557355 CNV gain 21841781
nsv834568 CNV loss 17160897
nsv964930 CNV duplication 23825009
nsv973021 CNV duplication 23825009
nsv976579 CNV duplication 23825009
nsv979182 CNV duplication 23825009

Relevant External Links for MIR1244-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1244-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1244-3 Gene

Disorders for MIR1244-3 Gene

Relevant External Links for MIR1244-3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1244-3

No disorders were found for MIR1244-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1244-3 Gene

Publications for MIR1244-3 Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR1244-3 Gene

Sources for MIR1244-3 Gene

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