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Aliases for MIR1237 Gene

Subcategory (RNA class) for MIR1237 Gene


Quality Score for this RNA gene is


Aliases for MIR1237 Gene

  • MicroRNA 1237 2 3 5
  • Hsa-Mir-1237 3
  • MIRN1237 3

External Ids for MIR1237 Gene

Previous HGNC Symbols for MIR1237 Gene

  • MIRN1237

Previous GeneCards Identifiers for MIR1237 Gene

  • GC00U922958
  • GC11P063894
  • GC11P064136

Summaries for MIR1237 Gene

Entrez Gene Summary for MIR1237 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1237 Gene

MIR1237 (MicroRNA 1237) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR1237 include Spinal Chordoma.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1237 Gene

Genomics for MIR1237 Gene

Regulatory Elements for MIR1237 Gene

Enhancers for MIR1237 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F064394 1 Ensembl ENCODE 12.1 +27.0 26999 2.8 CBX3 INSM2 KLF17 ZBTB7A ZIC2 OSR2 ZNF316 CBX1 SMARCA4 PATZ1 ENSG00000231680 RPS6KA4 MIR1237 LOC100996455 NRXN2 TRMT112 CCDC88B GC11M064381
GH11F064347 0.6 ENCODE 11.8 -20.2 -20221 1.9 BCOR KLF1 JUN CHD4 ZMYM3 MAX CEBPG ZNF366 POLR2A PATZ1 LOC102723878 MIR1237 PRDX5 TRMT112 ESRRA TEX40 ENSG00000207024 KCNK4 KCNK4-TEX40 BAD
GH11F064438 1.1 FANTOM5 ENCODE 11.2 +70.5 70512 1.3 HDAC1 TBL1XR1 NFRKB ZNF121 GATA2 SMARCA5 SMAD5 ZBTB11 USF2 HDAC8 SLC22A12 NRXN2 SLC22A11 MIR1237 OTUB1 GC11P064445 ENSG00000231492
GH11F064437 0.7 FANTOM5 11.2 +69.1 69060 0.2 HDGF ATF1 CREB3L1 ZBTB11 DPF2 ARID1B OSR2 IKZF1 ZNF341 MLLT1 SLC22A12 NRXN2 SLC22A11 MIR1237 RPS6KA4 CDC42BPG GC11P064445 ENSG00000231492
GH11F064501 0.2 ENCODE 10.7 +133.6 133619 1.9 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF143 C11orf84 ENSG00000237410 NEAT1 NRXN2 SLC22A11 SLC22A12 MIR1237 LOC100996455 C11orf95 FAU
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR1237 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1237 Gene

64,368,602 bp from pter
64,368,703 bp from pter
102 bases
Plus strand

Genomic View for MIR1237 Gene

Genes around MIR1237 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1237 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1237 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1237 Gene

Proteins for MIR1237 Gene

Post-translational modifications for MIR1237 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1237 Gene

Domains & Families for MIR1237 Gene

Gene Families for MIR1237 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1237: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1237 Gene

Function for MIR1237 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1237 Gene

Localization for MIR1237 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1237 Gene

Pathways & Interactions for MIR1237 Gene

SuperPathways for MIR1237 Gene

No Data Available

Interacting Proteins for MIR1237 Gene

Gene Ontology (GO) - Biological Process for MIR1237 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1237 Gene

Transcripts for MIR1237 Gene

mRNA/cDNA for MIR1237 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1237 Gene

No ASD Table

Relevant External Links for MIR1237 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1237 Gene

mRNA expression in normal human tissues for MIR1237 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1237 Gene:

genes like me logo Genes that share expression patterns with MIR1237: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR1237 Gene

Orthologs for MIR1237 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR1237 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-1237 35
  • 100 (a)
Species where no ortholog for MIR1237 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR1237 Gene

Gene Tree for MIR1237 (if available)
Gene Tree for MIR1237 (if available)

Paralogs for MIR1237 Gene

No data available for Paralogs for MIR1237 Gene

Variants for MIR1237 Gene

Sequence variations from dbSNP and Humsavar for MIR1237 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs111681371 -- 64,368,068(+) ACCAG(A/T)GTCTC intron-variant, upstream-variant-2KB
rs112357475 -- 64,368,196(+) TGGGC(C/T)GGAAG upstream-variant-2KB, reference, missense
rs112547025 -- 64,367,766(+) ATAAG(-/G)TTTTT intron-variant, upstream-variant-2KB
rs113909793 -- 64,368,658(+) GGGGC(A/G)GGGCC intron-variant, nc-transcript-variant
rs114987847 -- 64,367,601(+) CCACC(A/C/G)TGCCT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR1237 Gene

Variant ID Type Subtype PubMed ID
nsv832186 CNV loss 17160897
nsv832187 CNV loss 17160897

Relevant External Links for MIR1237 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1237 Gene

Disorders for MIR1237 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR1237 Gene - From: GeneCards

Disorder Aliases PubMed IDs
spinal chordoma
  • chordoma of spine
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for MIR1237

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with MIR1237: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR1237 Gene

Publications for MIR1237 Gene

  1. Epigenetically silenced microRNAs in gastric cancer: Functional analysis and identification of their target genes. (PMID: 26043902) Bae J.H. … Yi J.M. (Oncol. Rep. 2015) 3 64
  2. Reduced expression of miRNA-1237-3p associated with poor survival of spinal chordoma patients. (PMID: 25850393) Zou M.X. … Deng Y.W. (Eur Spine J 2015) 3 64
  3. Mammalian mirtron genes. (PMID: 17964270) Berezikov E. … Lai E.C. (Mol. Cell 2007) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1237 Gene

Sources for MIR1237 Gene

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