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MIR1233-1 Gene(RNA Gene)

MicroRNA 1233-1

GCID:
GC15M034382
GIFtS:
12
Genes Participants
UDN Logo

Aliases for MIR1233-1 Gene

Subcategory (RNA class) for MIR1233-1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1233-1 Gene

  • MicroRNA 1233-1 2 3 5
  • MicroRNA 1233 2 3
  • Hsa-Mir-1233-1 3
  • Hsa-Mir-1233 3
  • MIRN1233 3
  • MIR1233 3

External Ids for MIR1233-1 Gene

ORGUL Members for MIR1233-1 Gene

Previous HGNC Symbols for MIR1233-1 Gene

  • MIRN1233
  • MIR1233

Previous GeneCards Identifiers for MIR1233-1 Gene

  • GC15M034674

Summaries for MIR1233-1 Gene

Entrez Gene Summary for MIR1233-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1233-1 Gene

MIR1233-1 (MicroRNA 1233-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1233-1 Gene

Genomics for MIR1233-1 Gene

Products:

  1. Regulatory Element

Genomic Location for MIR1233-1 Gene

Chromosome:
15
Start:
34,382,069 bp from pter
End:
34,382,150 bp from pter
Size:
82 bases
Orientation:
Minus strand

Genomic View for MIR1233-1 Gene

Genes around MIR1233-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1233-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1233-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR1233-1 Gene

ORGUL Member Location for MIR1233-1 Gene

ORGUL Member Location for MIR1233-1 gene

No data available for Regulatory Elements for MIR1233-1 Gene

Proteins for MIR1233-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MIR1233-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1233-1 Gene

Domains & Families for MIR1233-1 Gene

Gene Families for MIR1233-1 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1233-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1233-1 Gene

Function for MIR1233-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1233-1 Gene

Localization for MIR1233-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1233-1 Gene

Pathways & Interactions for MIR1233-1 Gene

SuperPathways for MIR1233-1 Gene

PathCards logo More details on SuperPathways for MIR1233-1
No Data Available

Interacting Proteins for MIR1233-1 Gene

Gene Ontology (GO) - Biological Process for MIR1233-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1233-1 Gene

Drugs & Compounds for MIR1233-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MIR1233-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MIR1233-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1233-1 Gene

No ASD Table

Relevant External Links for MIR1233-1 Gene

GeneLoc Exon Structure for
MIR1233-1
ECgene alternative splicing isoforms for
MIR1233-1

Expression for MIR1233-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1233-1 Gene

Orthologs for MIR1233-1 Gene

Evolution for MIR1233-1 Gene

ENSEMBL:
Gene Tree for MIR1233-1 (if available)
TreeFam:
Gene Tree for MIR1233-1 (if available)

No data available for Orthologs for MIR1233-1 Gene

Paralogs for MIR1233-1 Gene

No data available for Paralogs for MIR1233-1 Gene

Variants for MIR1233-1 Gene

Sequence variations from dbSNP and Humsavar for MIR1233-1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1024632624 -- 34,381,792(+) AATTT(G/T)CCGTG nc-transcript-variant, downstream-variant-500B, reference, synonymous-codon
rs1028472728 -- 34,381,874(+) GTGCT(C/G)AGCTG intron-variant, downstream-variant-500B
rs1032070275 -- 34,381,832(+) CACCA(C/T)CTCCT nc-transcript-variant, downstream-variant-500B, reference, missense
rs1059868 -- 34,382,456(-) GGTGA(C/T)GGAGA nc-transcript-variant, upstream-variant-2KB, reference, missense
rs112627210 -- 34,382,066(+) GTACT(G/T)TCCTG nc-transcript-variant, downstream-variant-500B, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MIR1233-1 Gene

Variant ID Type Subtype PubMed ID
dgv107n111 CNV duplication 26073780
dgv21e213 CNV loss 24956385
dgv22e213 CNV gain 24956385
dgv2550n100 CNV gain 25217958
dgv2551n100 CNV gain 25217958
dgv2552n100 CNV gain 25217958
dgv2553n100 CNV loss 25217958
dgv2554n100 CNV loss 25217958
dgv2557n100 CNV loss 25217958
dgv2558n100 CNV gain+loss 25217958
dgv2559n100 CNV gain+loss 25217958
dgv2562n100 CNV gain+loss 25217958
dgv2563n100 CNV loss 25217958
dgv2569n100 CNV loss 25217958
dgv2570n100 CNV loss 25217958
dgv2571n100 CNV gain 25217958
dgv2572n100 CNV gain 25217958
dgv2574n100 CNV loss 25217958
dgv302e201 CNV deletion 23290073
dgv313n27 CNV loss 19166990
dgv314n27 CNV gain 19166990
dgv43e203 CNV gain+loss 21179565
dgv4456n54 CNV gain 21841781
dgv4458n54 CNV loss 21841781
dgv4459n54 CNV loss 21841781
dgv4468n54 CNV loss 21841781
dgv4475n54 CNV gain 21841781
dgv4476n54 CNV loss 21841781
dgv4477n54 CNV loss 21841781
dgv4482n54 CNV loss 21841781
esv2751533 CNV loss 17911159
esv2760024 CNV gain+loss 17122850
esv27955 CNV gain+loss 19812545
esv33337 CNV gain+loss 17666407
esv3569431 CNV gain 25503493
esv3581626 CNV loss 25503493
esv3636115 CNV loss 21293372
esv3636116 CNV gain 21293372
esv3892664 CNV gain+loss 25118596
esv3892665 CNV loss 25118596
esv992827 CNV gain 20482838
nsv1039201 CNV gain 25217958
nsv1052620 CNV gain 25217958
nsv110 CNV deletion 15895083
nsv1160280 CNV deletion 26073780
nsv1160285 CNV duplication 26073780
nsv1485 CNV deletion 18451855
nsv428303 CNV gain 18775914
nsv442698 CNV gain+loss 18776908
nsv469547 CNV loss 16826518
nsv469685 CNV loss 16826518
nsv471236 CNV loss 18288195
nsv471682 CNV gain+loss 15918152
nsv482177 CNV gain 20164927
nsv509567 CNV insertion 20534489
nsv517751 CNV gain+loss 19592680
nsv568926 CNV gain 21841781
nsv569004 CNV gain+loss 21841781
nsv819187 CNV gain 19587683
nsv821682 CNV loss 15273396
nsv827290 CNV loss 20364138
nsv9241 CNV gain+loss 18304495
nsv974557 CNV duplication 23825009
nsv984049 CNV duplication 23825009

Relevant External Links for MIR1233-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1233-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1233-1 Gene

Disorders for MIR1233-1 Gene

Relevant External Links for MIR1233-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1233-1

No disorders were found for MIR1233-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1233-1 Gene

Publications for MIR1233-1 Gene

  1. MicroRNAs in renal cell carcinoma: diagnostic implications of serum miR-1233 levels. (PMID: 21984948) Wulfken L.M. … Ellinger J. (PLoS ONE 2011) 3 64
  2. Mammalian mirtron genes. (PMID: 17964270) Berezikov E. … Lai E.C. (Mol. Cell 2007) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1233-1 Gene

Sources for MIR1233-1 Gene

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