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MIR1233-1 Gene(RNA Gene)

MicroRNA 1233-1

GCID:
GC15M034382
GIFtS:
12
Genes Participants
UDN Logo

Aliases for MIR1233-1 Gene

Subcategory (RNA class) for MIR1233-1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR1233-1 Gene

  • MicroRNA 1233-1 2 3 5
  • MicroRNA 1233 2 3
  • Hsa-Mir-1233-1 3
  • Hsa-Mir-1233 3
  • MIRN1233 3
  • MIR1233 3

External Ids for MIR1233-1 Gene

ORGUL Members for MIR1233-1 Gene

Previous HGNC Symbols for MIR1233-1 Gene

  • MIRN1233
  • MIR1233

Previous GeneCards Identifiers for MIR1233-1 Gene

  • GC15M034674

Summaries for MIR1233-1 Gene

Entrez Gene Summary for MIR1233-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1233-1 Gene

MIR1233-1 (MicroRNA 1233-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1233-1 Gene

Genomics for MIR1233-1 Gene

Products:

  1. Regulatory Element

Genomic Location for MIR1233-1 Gene

Chromosome:
15
Start:
34,382,069 bp from pter
End:
34,382,150 bp from pter
Size:
82 bases
Orientation:
Minus strand

Genomic View for MIR1233-1 Gene

Genes around MIR1233-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1233-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1233-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR1233-1 Gene

ORGUL Member Location for MIR1233-1 Gene

ORGUL Member Location for MIR1233-1 gene

No data available for Regulatory Elements for MIR1233-1 Gene

Proteins for MIR1233-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MIR1233-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1233-1 Gene

Domains & Families for MIR1233-1 Gene

Gene Families for MIR1233-1 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1233-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1233-1 Gene

Function for MIR1233-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1233-1 Gene

Localization for MIR1233-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1233-1 Gene

Pathways & Interactions for MIR1233-1 Gene

SuperPathways for MIR1233-1 Gene

PathCards logoMore details on SuperPathways for MIR1233-1
No Data Available

Interacting Proteins for MIR1233-1 Gene

Gene Ontology (GO) - Biological Process for MIR1233-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1233-1 Gene

Drugs & Compounds for MIR1233-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MIR1233-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for MIR1233-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1233-1 Gene

No ASD Table

Relevant External Links for MIR1233-1 Gene

GeneLoc Exon Structure for
MIR1233-1
ECgene alternative splicing isoforms for
MIR1233-1

Expression for MIR1233-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR1233-1 Gene

Orthologs for MIR1233-1 Gene

Evolution for MIR1233-1 Gene

ENSEMBL:
Gene Tree for MIR1233-1 (if available)
TreeFam:
Gene Tree for MIR1233-1 (if available)

No data available for Orthologs for MIR1233-1 Gene

Paralogs for MIR1233-1 Gene

No data available for Paralogs for MIR1233-1 Gene

Variants for MIR1233-1 Gene

Sequence variations from dbSNP and Humsavar for MIR1233-1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs756912860 -- 34,381,656(+) AGCCG(-/C)CCCCC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR1233-1 Gene

Variant ID Type Subtype PubMed ID
esv33337 CNV Gain+Loss 17666407
dgv730e1 CNV Complex 17122850
dgv731e1 CNV Complex 17122850
nsv428303 CNV Gain 18775914
nsv471682 CNV Gain+Loss 15918152
nsv469547 CNV Loss 16826518
dgv732e1 CNV Complex 17122850
nsv509567 CNV Insertion 20534489
nsv1485 CNV Loss 18451855
nsv517751 CNV Gain+Loss 19592680
nsv471236 CNV Loss 18288195
nsv827290 CNV Loss 20364138
nsv903987 CNV Gain+Loss 21882294
dgv2338n71 CNV Loss 21882294
dgv2339n71 CNV Gain+Loss 21882294
dgv2340n71 CNV Gain 21882294
dgv733e1 CNV Complex 17122850
esv27955 CNV Gain+Loss 19812545
nsv482177 CNV Gain 20164927
nsv819187 CNV Gain 19587683
dgv338e201 CNV Deletion 23290073
esv992827 CNV Gain 20482838
nsv903995 CNV Gain 21882294
dgv2341n71 CNV Loss 21882294
nsv9241 CNV Gain+Loss 18304495
nsv110 CNV Loss 15895083
dgv2346n71 CNV Loss 21882294
nsv821682 CNV Loss 15273396
nsv904029 CNV Gain+Loss 21882294
nsv442698 CNV CNV 18776908
dgv734e1 CNV Complex 17122850
dgv735e1 CNV Complex 17122850
dgv313n27 CNV Loss 19166990
dgv314n27 CNV Gain 19166990
dgv2349n71 CNV Gain+Loss 21882294
dgv2350n71 CNV Loss 21882294
nsv469685 CNV Loss 16826518
dgv2354n71 CNV Loss 21882294
essv985 CNV CNV 17122850
esv2751533 CNV Loss 17911159

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MIR1233-1 Gene

Disorders for MIR1233-1 Gene

Relevant External Links for MIR1233-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1233-1

No disorders were found for MIR1233-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1233-1 Gene

Publications for MIR1233-1 Gene

  1. MicroRNAs in renal cell carcinoma: diagnostic implications of serum miR-1233 levels. (PMID: 21984948) Wulfken L.M. … Ellinger J. (PLoS ONE 2011) 3 67
  2. Mammalian mirtron genes. (PMID: 17964270) Berezikov E. … Lai E.C. (Mol. Cell 2007) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR1233-1 Gene

Sources for MIR1233-1 Gene

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