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Aliases for MIR1205 Gene

Subcategory (RNA class) for MIR1205 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1205 Gene

  • MicroRNA 1205 2 3 5
  • Hsa-Mir-1205 3
  • MIRN1205 3

External Ids for MIR1205 Gene

Previous HGNC Symbols for MIR1205 Gene

  • MIRN1205

Previous GeneCards Identifiers for MIR1205 Gene

  • GC00U923075
  • GC08P129043
  • GC08P128972

Summaries for MIR1205 Gene

Entrez Gene Summary for MIR1205 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1205 Gene

MIR1205 (MicroRNA 1205) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1205 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1205 Gene

Genomics for MIR1205 Gene

GeneHancer (GH) Regulatory Elements for MIR1205 Gene

Promoters and enhancers for MIR1205 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I127959 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 550.8 0.0 -1 2.2 HDGF PKNOX1 ARNT ZNF766 E2F8 REST ZNF592 MEF2D SMARCA4 NBN MIR1205 RNU1-106P MYC TMEM75 PVT1
GH08I127958 Enhancer 0.6 dbSUPER 550.8 -1.8 -1769 0.9 ZNF639 ZNF197 NR4A1 MAX MNT ZBTB40 ZNF592 MITF MLLT1 ZBTB33 MIR1205 TMEM75 PVT1
GH08I127915 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12 -42.0 -42007 5.9 HDGF FOXA2 ELK1 ZNF143 FOS RUNX3 REST ZNF592 SREBF1 NFIL3 MIR1205 TMEM75 RNU1-106P MIR1204 PVT1 RNU4-25P ENSG00000278324
GH08I128045 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +87.7 87712 6.2 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT IRF4 ZNF766 ZNF143 FOS JUNB MIR1207 RNU1-106P SRRM1P1 RNU4-25P MIR1205 TMEM75 MIR1208 PVT1
GH08I127924 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.5 -31.9 -31932 7.8 SMAD1 KLF17 RAD21 POLR3A ZNF143 FOS CREM RXRA CEBPB HDAC8 MIR1205 RNU1-106P TMEM75 MIR1204 PVT1 MYC CASC11 RNU4-25P MIR1207 ENSG00000278324
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1205 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1205 Gene

Genomic Locations for MIR1205 Gene
chr8:127,960,633-127,960,695
(GRCh38/hg38)
Size:
63 bases
Orientation:
Plus strand
chr8:128,972,879-128,972,941
(GRCh37/hg19)

Genomic View for MIR1205 Gene

Genes around MIR1205 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1205 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1205 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1205 Gene

Proteins for MIR1205 Gene

Post-translational modifications for MIR1205 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1205 Gene

Domains & Families for MIR1205 Gene

Gene Families for MIR1205 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1205: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1205 Gene

Function for MIR1205 Gene

Phenotypes From GWAS Catalog for MIR1205 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1205 Gene

Localization for MIR1205 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1205 Gene

Pathways & Interactions for MIR1205 Gene

SuperPathways for MIR1205 Gene

No Data Available

Interacting Proteins for MIR1205 Gene

Gene Ontology (GO) - Biological Process for MIR1205 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1205 Gene

Drugs & Compounds for MIR1205 Gene

No Compound Related Data Available

Transcripts for MIR1205 Gene

mRNA/cDNA for MIR1205 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1205 Gene

No ASD Table

Relevant External Links for MIR1205 Gene

GeneLoc Exon Structure for
MIR1205
ECgene alternative splicing isoforms for
MIR1205

Expression for MIR1205 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1205 Gene:

MIR1205
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1205 Gene

Orthologs for MIR1205 Gene

Evolution for MIR1205 Gene

ENSEMBL:
Gene Tree for MIR1205 (if available)
TreeFam:
Gene Tree for MIR1205 (if available)

No data available for Orthologs for MIR1205 Gene

Paralogs for MIR1205 Gene

No data available for Paralogs for MIR1205 Gene

Variants for MIR1205 Gene

Sequence variations from dbSNP and Humsavar for MIR1205 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1002859460 -- 127,959,588(+) A/G upstream_transcript_variant
rs1002911877 -- 127,959,324(+) C/T upstream_transcript_variant
rs1004267872 -- 127,959,872(+) G/A/C/T upstream_transcript_variant
rs1005956246 -- 127,960,607(+) G/A/C upstream_transcript_variant
rs1006172697 -- 127,960,967(+) A/ downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1205 Gene

Variant ID Type Subtype PubMed ID
nsv499795 OTHER inversion 21111241
nsv7419 OTHER inversion 18451855

Additional Variant Information for MIR1205 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1205

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1205 Gene

Disorders for MIR1205 Gene

Additional Disease Information for MIR1205

No disorders were found for MIR1205 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1205 Gene

Publications for MIR1205 Gene

  1. The identification of microRNAs in a genomically unstable region of human chromosome 8q24. (PMID: 18314482) Huppi K … Caplen NJ (Molecular cancer research : MCR 2008) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1205 Gene

Sources for MIR1205 Gene

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