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Aliases for MIR1204 Gene

Subcategory (RNA class) for MIR1204 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1204 Gene

  • MicroRNA 1204 2 3 5
  • Hsa-Mir-1204 3

External Ids for MIR1204 Gene

Previous GeneCards Identifiers for MIR1204 Gene

  • GC00U923209
  • GC08P128808

Summaries for MIR1204 Gene

Entrez Gene Summary for MIR1204 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1204 Gene

MIR1204 (MicroRNA 1204) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1204 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1204 Gene

Genomics for MIR1204 Gene

GeneHancer (GH) Regulatory Elements for MIR1204 Gene

Promoters and enhancers for MIR1204 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I127793 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 550.8 -0.5 -456 4.1 ATF1 SMAD1 ZFP64 NEUROD1 SIN3A DMAP1 YBX1 ZBTB7B ELK1 ATF7 PVT1 ENSG00000276443 MIR1204 GC08P127796 SRRM1P1 RNU1-106P MYC CASC11
GH08I127732 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.7 -57.9 -57860 11.6 ZFP64 IRF4 YY1 E2F8 ZNF143 ZNF263 SP3 NFYC SSRP1 ZNF610 MYC GC08P127737 GC08P127736 SRRM1P1 RNU1-106P MIR1204 PVT1 TMEM75 GC08P127740 CASC11
GH08I127758 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12 -35.8 -35779 2.8 HDGF PKNOX1 ATF1 ARNT SIN3A BRCA1 NCOA2 ZNF766 ATF7 NCOA1 PVT1 MIR1204 MYC CASC11 TMEM75 MIR1207 RNU4-25P GC08P127744
GH08I127863 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +72.4 72370 10.2 HDGF ATF1 PKNOX1 CLOCK NEUROD1 SIN3A YBX1 ZBTB7B YY1 ETS1 SRRM1P1 RNU1-106P MIR1204 PVT1 MYC CASC11 TMEM75 RNU4-25P ENSG00000278324
GH08I127874 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11 +81.5 81541 5.6 HDGF PKNOX1 RB1 SIN3A ZNF48 RARA SCRT2 ZNF207 ATF7 FOS SRRM1P1 MIR1204 PVT1 TMEM75 ENSG00000278324
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1204 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1204 Gene

Genomic Locations for MIR1204 Gene
chr8:127,795,962-127,796,028
(GRCh38/hg38)
Size:
67 bases
Orientation:
Plus strand
chr8:128,806,779-129,113,499
(GRCh37/hg19)

Genomic View for MIR1204 Gene

Genes around MIR1204 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1204 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1204 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1204 Gene

Proteins for MIR1204 Gene

Post-translational modifications for MIR1204 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1204 Gene

Domains & Families for MIR1204 Gene

Gene Families for MIR1204 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1204: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1204 Gene

Function for MIR1204 Gene

Phenotypes From GWAS Catalog for MIR1204 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1204 Gene

Localization for MIR1204 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1204 Gene

Pathways & Interactions for MIR1204 Gene

SuperPathways for MIR1204 Gene

No Data Available

Interacting Proteins for MIR1204 Gene

Gene Ontology (GO) - Biological Process for MIR1204 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1204 Gene

Drugs & Compounds for MIR1204 Gene

No Compound Related Data Available

Transcripts for MIR1204 Gene

mRNA/cDNA for MIR1204 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1204 Gene

No ASD Table

Relevant External Links for MIR1204 Gene

GeneLoc Exon Structure for
MIR1204
ECgene alternative splicing isoforms for
MIR1204

Expression for MIR1204 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1204 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1204 Gene:

MIR1204
genes like me logo Genes that share expression patterns with MIR1204: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1204 Gene

Orthologs for MIR1204 Gene

Evolution for MIR1204 Gene

ENSEMBL:
Gene Tree for MIR1204 (if available)
TreeFam:
Gene Tree for MIR1204 (if available)

No data available for Orthologs for MIR1204 Gene

Paralogs for MIR1204 Gene

No data available for Paralogs for MIR1204 Gene

Variants for MIR1204 Gene

Sequence variations from dbSNP and Humsavar for MIR1204 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000625904 -- 127,794,274(+) C/T upstream_transcript_variant
rs1000860938 -- 127,794,434(+) G/A upstream_transcript_variant
rs1004520117 -- 127,795,086(+) G/A upstream_transcript_variant
rs1004572488 -- 127,795,323(+) A/C upstream_transcript_variant
rs1005780588 -- 127,794,987(+) G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1204 Gene

Variant ID Type Subtype PubMed ID
esv2752208 CNV gain 17911159
nsv499795 OTHER inversion 21111241
nsv7419 OTHER inversion 18451855
nsv831458 CNV loss 17160897

Additional Variant Information for MIR1204 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1204

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1204 Gene

Disorders for MIR1204 Gene

Additional Disease Information for MIR1204

No disorders were found for MIR1204 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1204 Gene

Publications for MIR1204 Gene

  1. MiR-1204 sensitizes nasopharyngeal carcinoma cells to paclitaxel both in vitro and in vivo. (PMID: 25756509) Peng X … Cao K (Cancer biology & therapy 2015) 3 58
  2. p53-Dependent induction of PVT1 and miR-1204. (PMID: 22110125) Barsotti AM … Prives C (The Journal of biological chemistry 2012) 3 58
  3. The identification of microRNAs in a genomically unstable region of human chromosome 8q24. (PMID: 18314482) Huppi K … Caplen NJ (Molecular cancer research : MCR 2008) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1204 Gene

Sources for MIR1204 Gene

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