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Aliases for MIR1203 Gene

Subcategory (RNA class) for MIR1203 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR1203 Gene

  • MicroRNA 1203 2 3 5
  • Hsa-Mir-1203 3
  • MIRN1203 3

External Ids for MIR1203 Gene

Previous HGNC Symbols for MIR1203 Gene

  • MIRN1203

Previous GeneCards Identifiers for MIR1203 Gene

  • GC00U923061
  • GC17M043589
  • GC17M046233

Summaries for MIR1203 Gene

Entrez Gene Summary for MIR1203 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1203 Gene

MIR1203 (MicroRNA 1203) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1203 Gene

Genomics for MIR1203 Gene

Regulatory Elements for MIR1203 Gene

Enhancers for MIR1203 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G048293 2.1 Ensembl ENCODE 10.3 -138.4 -138387 2.8 ZBTB40 ZNF766 SCRT2 RELB FOS IKZF2 CREM ZNF362 ELF4 JUNB SKAP1 MIR1203 HOXB9 HOXB-AS4 SNX11 CBX1 CDK5RAP3 PRR15L EGID-105371807 ENSG00000266222
GH17G048238 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11 -85.7 -85652 7.2 HDGF PKNOX1 ARNT SIN3A FEZF1 ZNF766 FOS JUNB TBX21 ZNF592 SNX11 COPZ2 CDK5RAP3 ITGB3 RNU6-1152P SKAP1 MIR1203 EGID-105371807 ENSG00000266601 CBX1
GH17G048023 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +131.2 131189 4.6 CREB3L1 ZFP64 DMAP1 FEZF1 ZNF143 ZNF548 SP3 NFYC TBX21 MEF2D SNX11 ENSG00000266601 CDK5RAP3 COPZ2 ITGB3 ENSG00000253347 MRPL45P2 SKAP1 PRR15L NFE2L1
GH17G048538 2.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 8.9 -416.7 -416655 68.8 CREB3L1 AGO1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 MEF2D ZNF610 HOXB2 SKAP1 HOXB9 HOXB3 ENSG00000264701 HOXB-AS1 HOXB-AS3 SUMO2P17 HOXB-AS4 HOXB1
GH17G048044 1.7 VISTA ENCODE dbSUPER 9.8 +105.4 105405 13.0 CREB3L1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 SNX11 MRPL45P2 SCRN2 COPZ2 CDK5RAP3 ENSG00000253347 ENSG00000264701 KPNB1 CBX1 RNU6-1201P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR1203 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR1203 Gene

Chromosome:
17
Start:
48,156,427 bp from pter
End:
48,156,511 bp from pter
Size:
85 bases
Orientation:
Minus strand

Genomic View for MIR1203 Gene

Genes around MIR1203 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1203 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1203 Gene

Proteins for MIR1203 Gene

Post-translational modifications for MIR1203 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1203 Gene

Domains & Families for MIR1203 Gene

Gene Families for MIR1203 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1203: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1203 Gene

Function for MIR1203 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1203 Gene

Localization for MIR1203 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR1203 Gene

Pathways & Interactions for MIR1203 Gene

SuperPathways for MIR1203 Gene

No Data Available

Interacting Proteins for MIR1203 Gene

Gene Ontology (GO) - Biological Process for MIR1203 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR1203 Gene

Drugs & Compounds for MIR1203 Gene

No Compound Related Data Available

Transcripts for MIR1203 Gene

mRNA/cDNA for MIR1203 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1203 Gene

No ASD Table

Relevant External Links for MIR1203 Gene

GeneLoc Exon Structure for
MIR1203
ECgene alternative splicing isoforms for
MIR1203

Expression for MIR1203 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1203 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1203 Gene:

MIR1203
genes like me logo Genes that share expression patterns with MIR1203: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1203 Gene

Orthologs for MIR1203 Gene

Evolution for MIR1203 Gene

ENSEMBL:
Gene Tree for MIR1203 (if available)
TreeFam:
Gene Tree for MIR1203 (if available)

No data available for Orthologs for MIR1203 Gene

Paralogs for MIR1203 Gene

No data available for Paralogs for MIR1203 Gene

Variants for MIR1203 Gene

Sequence variations from dbSNP and Humsavar for MIR1203 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1004681814 -- 48,156,176(+) TTTCA(C/T)GTTCA intron-variant, downstream-variant-500B
rs1008001350 -- 48,157,987(+) AGCCT(A/G)ACCAA intron-variant, upstream-variant-2KB
rs1011251956 -- 48,157,573(+) TGCCC(A/C)GGCTG intron-variant, upstream-variant-2KB
rs1011259937 -- 48,157,246(+) TTTTT(G/T)TTTTT intron-variant, upstream-variant-2KB
rs1012652279 -- 48,158,111(+) GGTGG(-/AGGTTGCAGTGAGCCA)AGATC intron-variant, upstream-variant-2KB

Relevant External Links for MIR1203 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1203

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR1203 Gene

Disorders for MIR1203 Gene

Relevant External Links for MIR1203

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR1203

No disorders were found for MIR1203 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1203 Gene

Publications for MIR1203 Gene

  1. Small RNAs analysis in CLL reveals a deregulation of miRNA expression and novel miRNA candidates of putative relevance in CLL pathogenesis. (PMID: 17989717) Marton S. … Cayota A. (Leukemia 2008) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR1203 Gene

Sources for MIR1203 Gene

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