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Aliases for MIR10A Gene

Subcategory (RNA class) for MIR10A Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for MIR10A Gene

  • MicroRNA 10a 2 3
  • Hsa-Mir-10a 3
  • MiRNA10A 3
  • Mir-10a 3
  • MIRN10A 3

External Ids for MIR10A Gene

ORGUL Members for MIR10A Gene

Previous Symbols for MIR10A Gene

  • MIRN10A

Summaries for MIR10A Gene

Entrez Gene Summary for MIR10A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR10A Gene

MIR10A (MicroRNA 10a) is a RNA Gene, and belongs to lncRNA RNA class. Diseases associated with MIR10A include neuroblastoma. Among its related pathways are Proteoglycans in cancer and MicroRNAs in cancer.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR10A Gene

Genomics for MIR10A Gene

Genomic Location for MIR10A Gene

Start:
48,579,838 bp from pter
End:
48,579,947 bp from pter
Size:
110 bases
Orientation:
Minus strand

Genomic View for MIR10A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR10A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR10A Gene

No data available for Regulatory Elements for MIR10A Gene

Proteins for MIR10A Gene

Post-translational modifications for MIR10A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR10A Gene

Domains for MIR10A Gene

Gene Families for MIR10A Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR10A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR10A Gene

Function for MIR10A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR10A Gene

Localization for MIR10A Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR10A Gene

Pathways for MIR10A Gene

genes like me logo Genes that share pathways with MIR10A: view

Pathways by source for MIR10A Gene

2 KEGG pathways for MIR10A Gene

Interacting Proteins for MIR10A Gene

Gene Ontology (GO) - Biological Process for MIR10A Gene

None

Transcripts for MIR10A Gene

mRNA/cDNA for MIR10A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR10A Gene

No ASD Table

Relevant External Links for MIR10A Gene

GeneLoc Exon Structure for
MIR10A
ECgene alternative splicing isoforms for
MIR10A

Expression for MIR10A Gene

mRNA expression in normal human tissues for MIR10A Gene

mRNA differential expression in normal tissues according to GTEx for MIR10A Gene

This gene is overexpressed in Esophagus - Gastroesophageal Junction (7.4), Esophagus - Muscularis (5.2), and Colon - Sigmoid (4.5).
genes like me logo Genes that share expressions with MIR10A: view

Orthologs for MIR10A Gene

Evolution for MIR10A Gene

ENSEMBL:
Gene Tree for MIR10A (if available)
TreeFam:
Gene Tree for MIR10A (if available)

No data available for Orthologs for MIR10A Gene

Paralogs for MIR10A Gene

No data available for Paralogs for MIR10A Gene

Variants for MIR10A Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR10A Gene

Variant ID Type Subtype PubMed ID
nsv833469 CNV Loss 17160897
dgv3222n71 CNV Loss 21882294
dgv3223n71 CNV Loss 21882294
dgv988e1 CNV Complex 17122850
dgv3224n71 CNV Loss 21882294
nsv833471 CNV Gain 17160897
dgv369n27 CNV Loss 19166990

Relevant External Links for MIR10A Gene

HapMap Linkage Disequilibrium report
MIR10A

No data available for Sequence variations from dbSNP and Humsavar for MIR10A Gene

Disorders for MIR10A Gene

(1) MalaCards Diseases for MIR10A Gene

Search for MIR10A Gene in MalaCards »
genes like me logo Genes that share disorders with MIR10A: view

No data available for UniProtKB/Swiss-Prot for MIR10A Gene

Publications for MIR10A Gene

  1. Vertebrate microRNA genes. (PMID: 12624257) Lim L.P. … Bartel D.P. (Science 2003) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  3. MicroRNA fingerprints during human megakaryocytopoiesis. (PMID: 16549775) Garzon R. … Croce C.M. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3
  4. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P. … Tuschl T. (Cell 2007) 3
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3

Products for MIR10A Gene

Sources for MIR10A Gene

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