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Aliases for MIR100HG Gene

Subcategory (RNA class) for MIR100HG Gene


Quality Score for this RNA gene is


Aliases for MIR100HG Gene

  • Mir-100-Let-7a-2-Mir-125b-1 Cluster Host Gene 2 3 5
  • Mir-100-Let-7a-2 Cluster Host Gene (Non-Protein Coding) 2 3
  • Neuronal Differentiation LncRNA Hosting MiR-125 2 3
  • Adipogenesis Down-Regulated Transcript 1 2 3
  • LncRNA Neuronal 2 2 3
  • Mir-100-Let-7a-2 Cluster Host Gene 2
  • Linc-NeD125 3
  • LncRNA-N2 3
  • AGD1 3

External Ids for MIR100HG Gene

Previous GeneCards Identifiers for MIR100HG Gene

  • GC11M121961
  • GC11M121902
  • GC11M122089

Summaries for MIR100HG Gene

Entrez Gene Summary for MIR100HG Gene

  • This gene produces long non-coding RNAs that act as regulators of cell proliferation. Alternative promoter usage and splicing results in multiple transcript variants. Some transcript variants may promote growth, while others may act to negatively regulate cell division. [provided by RefSeq, May 2016]

GeneCards Summary for MIR100HG Gene

MIR100HG (Mir-100-Let-7a-2-Mir-125b-1 Cluster Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR100HG Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR100HG Gene

Genomics for MIR100HG Gene

Regulatory Elements for MIR100HG Gene

Enhancers for MIR100HG Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H122185 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.6 +364.5 364497 13.3 GTF2F1 TBP FOXA2 JUN MAX CHD4 RAD21 BATF RFX5 ZKSCAN1 MIRLET7A2 BLID MIR100HG ENSG00000255219 GC11M122182 GC11P122184
GH11H122174 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.6 +377.9 377928 8.4 MAFG CHD1 CEBPB EP300 MAFF JUND ZNF316 POLR2A SCRT2 FOS BLID MIR100HG ENSG00000255219 GC11P122184 MIR100 GC11M122154 GC11M122156
GH11H122135 1.3 Ensembl ENCODE dbSUPER 11.6 +417.8 417845 7.3 FOXA2 JUN BRCA1 YY1 ETS1 GATA3 POLR2A RERE HNF4G FOS BLID MIR100HG MIRLET7A2 GC11P122118
GH11H122090 0.9 ENCODE dbSUPER 16.3 +458.1 458056 16.4 CTCF MXI1 FOXA2 CHD1 EBF1 RAD21 JUND POLR2A FOS RCOR1 MIR100HG GC11M122101 GC11M122095
GH11H122043 1.3 FANTOM5 Ensembl ENCODE dbSUPER 11.2 +510.9 510921 3.6 JUND JUN FOS MAFK BLID MIR100HG MIR125B1 GC11P122071 GC11P122016
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR100HG on UCSC Golden Path with GeneCards custom track

Promoters for MIR100HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000046202 -79 401 CTCF L3MBTL2 MGA

Genomic Locations for MIR100HG Gene

Genomic Locations for MIR100HG Gene
528,395 bases
Minus strand

Genomic View for MIR100HG Gene

Genes around MIR100HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR100HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR100HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR100HG Gene

Proteins for MIR100HG Gene

Post-translational modifications for MIR100HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR100HG Gene

Domains & Families for MIR100HG Gene

Gene Families for MIR100HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR100HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR100HG Gene

Function for MIR100HG Gene

Phenotypes From GWAS Catalog for MIR100HG Gene

Phenotypes for MIR100HG Gene

GenomeRNAi human phenotypes for MIR100HG:
genes like me logo Genes that share phenotypes with MIR100HG: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR100HG Gene

Localization for MIR100HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR100HG Gene

Pathways & Interactions for MIR100HG Gene

SuperPathways for MIR100HG Gene

No Data Available

Interacting Proteins for MIR100HG Gene

Gene Ontology (GO) - Biological Process for MIR100HG Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR100HG Gene

Drugs & Compounds for MIR100HG Gene

No Compound Related Data Available

Transcripts for MIR100HG Gene

Unigene Clusters for MIR100HG Gene

Mir-100-let-7a-2 cluster host gene (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR100HG Gene

No ASD Table

Relevant External Links for MIR100HG Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR100HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR100HG Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR100HG Gene:


SOURCE GeneReport for Unigene cluster for MIR100HG Gene:

genes like me logo Genes that share expression patterns with MIR100HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR100HG Gene

Orthologs for MIR100HG Gene

Evolution for MIR100HG Gene

Gene Tree for MIR100HG (if available)
Gene Tree for MIR100HG (if available)

No data available for Orthologs for MIR100HG Gene

Paralogs for MIR100HG Gene

No data available for Paralogs for MIR100HG Gene

Variants for MIR100HG Gene

Sequence variations from dbSNP and Humsavar for MIR100HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000008937 -- 122,365,300(+) TGTGA(C/T)ACCTA intron-variant
rs1000010241 -- 122,407,453(+) ATGAA(C/T)CTGGG intron-variant
rs1000010295 -- 122,252,348(+) CTTCA(-/C)GTTTT intron-variant
rs1000011088 -- 122,322,298(+) TTTGC(G/T)GTAGT intron-variant
rs1000016297 -- 122,378,538(+) TCTCA(C/T)CTTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR100HG Gene

Variant ID Type Subtype PubMed ID
nsv477824 CNV novel sequence insertion 20440878
nsv476130 CNV novel sequence insertion 20440878
nsv1119921 CNV deletion 24896259
esv3310060 CNV mobile element insertion 20981092
esv275465 CNV gain+loss 21479260
dgv17n68 CNV gain 17160897

Relevant External Links for MIR100HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR100HG Gene

Disorders for MIR100HG Gene

Relevant External Links for MIR100HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR100HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR100HG Gene

Publications for MIR100HG Gene

  1. LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia. (PMID: 25027842) Emmrich S … Klusmann JH (Molecular cancer 2014) 2 3 60
  2. Evaluation of BLID and LOC399959 as candidate genes for high myopia in the Chinese Han population. (PMID: 21031016) Zhao F … Zhou X (Molecular vision 2010) 2 3 60
  3. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K … Aizawa Y (Nucleic acids research 2009) 2 3 60
  4. Identification of linc-NeD125, a novel long non coding RNA that hosts miR-125b-1 and negatively controls proliferation of human neuroblastoma cells. (PMID: 26480000) Bevilacqua V … Caffarelli E (RNA biology 2015) 3 60
  5. A genome-wide association analysis identified a novel susceptible locus for pathological myopia at 11q24.1. (PMID: 19779542) Nakanishi H … Matsuda F (PLoS genetics 2009) 3 60

Products for MIR100HG Gene

Sources for MIR100HG Gene

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