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Aliases for MIR100HG Gene

Subcategory (RNA class) for MIR100HG Gene

miRNA

Quality Score for this RNA gene is

2

Aliases for MIR100HG Gene

  • Mir-100-Let-7a-2 Cluster Host Gene 2 3
  • Mir-100-Let-7a-2 Cluster Host Gene (Non-Protein Coding) 2 3
  • Adipogenesis Down-Regulated Transcript 1 2 3
  • LncRNA Neuronal 2 2 3
  • LncRNA-N2 3
  • AGD1 3

External Ids for MIR100HG Gene

Previous GeneCards Identifiers for MIR100HG Gene

  • GC11M121961
  • GC11M121902

Summaries for MIR100HG Gene

GeneCards Summary for MIR100HG Gene

MIR100HG (Mir-100-Let-7a-2 Cluster Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR100HG Gene

Genomics for MIR100HG Gene

Genomic Location for MIR100HG Gene

Start:
122,089,103 bp from pter
End:
122,203,062 bp from pter
Size:
113,960 bases
Orientation:
Minus strand

Genomic View for MIR100HG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR100HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR100HG Gene

No data available for Regulatory Elements for MIR100HG Gene

Proteins for MIR100HG Gene

Post-translational modifications for MIR100HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR100HG Gene

Domains for MIR100HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR100HG Gene

Function for MIR100HG Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR100HG Gene

Localization for MIR100HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR100HG Gene

Pathways for MIR100HG Gene

SuperPathways for MIR100HG Gene

No Data Available

Interacting Proteins for MIR100HG Gene

Gene Ontology (GO) - Biological Process for MIR100HG Gene

None

No data available for Pathways by source for MIR100HG Gene

Transcripts for MIR100HG Gene

Unigene Clusters for MIR100HG Gene

Mir-100-let-7a-2 cluster host gene (non-protein coding):
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MIR100HG

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR100HG Gene

No ASD Table

Relevant External Links for MIR100HG Gene

GeneLoc Exon Structure for
MIR100HG
ECgene alternative splicing isoforms for
MIR100HG

Expression for MIR100HG Gene

mRNA expression in normal human tissues for MIR100HG Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for MIR100HG Gene Hs.44098

genes like me logo Genes that share expressions with MIR100HG: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR100HG Gene

Orthologs for MIR100HG Gene

No data available for Orthologs and Evolution for MIR100HG Gene

Paralogs for MIR100HG Gene

No data available for Paralogs for MIR100HG Gene

Variants for MIR100HG Gene

Sequence variations from dbSNP and Humsavar for MIR100HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs477314 -- 122,193,523(-) TTCTT(A/G)TGTAT intron-variant
rs478627 -- 122,108,657(+) CTGTT(C/G)CCTCC intron-variant
rs479728 -- 122,162,107(+) GGTAT(G/T)GGGAC intron-variant
rs480477 -- 122,204,505(+) CATAC(A/G)GTGCA upstream-variant-2KB
rs482265 -- 122,156,805(+) AAAGA(A/G)AAAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR100HG Gene

Variant ID Type Subtype PubMed ID
dgv17n68 CNV Gain 17160897
nsv898430 CNV Gain 21882294
esv275465 CNV Gain+Loss 21479260
esv274332 CNV Insertion 20981092

Relevant External Links for MIR100HG Gene

HapMap Linkage Disequilibrium report
MIR100HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR100HG Gene

Disorders for MIR100HG Gene

No disorders were found for MIR100HG Gene.

No data available for UniProtKB/Swiss-Prot for MIR100HG Gene

Publications for MIR100HG Gene

  1. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K. … Aizawa Y. (Nucleic Acids Res. 2009) 2 3
  2. Evaluation of BLID and LOC399959 as candidate genes for high myopia in the Chinese Han population. (PMID: 21031016) Zhao F. … Zhou X. (Mol. Vis. 2010) 2 3
  3. LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia. (PMID: 25027842) Emmrich S. … Klusmann J.H. (Mol. Cancer 2014) 2 3
  4. A genome-wide association analysis identified a novel susceptible locus for pathological myopia at 11q24.1. (PMID: 19779542) Nakanishi H. … Matsuda F. (PLoS Genet. 2009) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MIR100HG Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR100HG
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR100HG
    • Block miRNA regulation of MIR100HG using miScript Target Protectors

    Sources for MIR100HG Gene

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