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Aliases for MIR100HG Gene

Subcategory (RNA class) for MIR100HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR100HG Gene

  • Mir-100-Let-7a-2 Cluster Host Gene 2 3 5
  • Mir-100-Let-7a-2 Cluster Host Gene (Non-Protein Coding) 2 3
  • Adipogenesis Down-Regulated Transcript 1 2 3
  • LncRNA Neuronal 2 2 3
  • LncRNA-N2 3
  • AGD1 3

External Ids for MIR100HG Gene

Previous GeneCards Identifiers for MIR100HG Gene

  • GC11M121961
  • GC11M121902

Summaries for MIR100HG Gene

GeneCards Summary for MIR100HG Gene

MIR100HG (Mir-100-Let-7a-2 Cluster Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR100HG Gene

Genomics for MIR100HG Gene

Regulatory Elements for MIR100HG Gene

Promoters for MIR100HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR100HG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR100HG Gene

Chromosome:
11
Start:
122,089,103 bp from pter
End:
122,422,871 bp from pter
Size:
333,769 bases
Orientation:
Minus strand

Genomic View for MIR100HG Gene

Genes around MIR100HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR100HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR100HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR100HG Gene

Proteins for MIR100HG Gene

Post-translational modifications for MIR100HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR100HG Gene

Domains & Families for MIR100HG Gene

Gene Families for MIR100HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR100HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR100HG Gene

Function for MIR100HG Gene

Phenotypes for MIR100HG Gene

GenomeRNAi human phenotypes for MIR100HG:
genes like me logo Genes that share phenotypes with MIR100HG: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR100HG Gene

Localization for MIR100HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR100HG Gene

Pathways & Interactions for MIR100HG Gene

SuperPathways for MIR100HG Gene

No Data Available

Interacting Proteins for MIR100HG Gene

Gene Ontology (GO) - Biological Process for MIR100HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR100HG Gene

Drugs & Compounds for MIR100HG Gene

No Compound Related Data Available

Transcripts for MIR100HG Gene

Unigene Clusters for MIR100HG Gene

Mir-100-let-7a-2 cluster host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR100HG Gene

No ASD Table

Relevant External Links for MIR100HG Gene

GeneLoc Exon Structure for
MIR100HG
ECgene alternative splicing isoforms for
MIR100HG

Expression for MIR100HG Gene

mRNA expression in normal human tissues for MIR100HG Gene

SOURCE GeneReport for Unigene cluster for MIR100HG Gene Hs.44098

genes like me logo Genes that share expression patterns with MIR100HG: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR100HG Gene

Orthologs for MIR100HG Gene

Evolution for MIR100HG Gene

ENSEMBL:
Gene Tree for MIR100HG (if available)
TreeFam:
Gene Tree for MIR100HG (if available)

No data available for Orthologs for MIR100HG Gene

Paralogs for MIR100HG Gene

No data available for Paralogs for MIR100HG Gene

Variants for MIR100HG Gene

Sequence variations from dbSNP and Humsavar for MIR100HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs497781 -- 122,174,755(-) CCTGC(A/C)AACAT intron-variant
rs508372 -- 122,132,665(+) TCCCT(A/C/T)GTCTG intron-variant
rs518839 -- 122,112,662(-) GCCTT(G/T)GGTTT intron-variant
rs487108 -- 122,096,474(-) AAACC(A/C)ATTGC intron-variant
rs527308 -- 122,176,222(-) ATTGG(A/G)GATCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR100HG Gene

Variant ID Type Subtype PubMed ID
dgv17n68 CNV Gain 17160897
nsv898430 CNV Gain 21882294
esv275465 CNV Gain+Loss 21479260
esv274332 CNV Insertion 20981092

Relevant External Links for MIR100HG Gene

HapMap Linkage Disequilibrium report
MIR100HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR100HG Gene

Disorders for MIR100HG Gene

Relevant External Links for MIR100HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR100HG

No disorders were found for MIR100HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR100HG Gene

Publications for MIR100HG Gene

  1. LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia. (PMID: 25027842) Emmrich S. … Klusmann J.H. (Mol. Cancer 2014) 2 3 67
  2. Evaluation of BLID and LOC399959 as candidate genes for high myopia in the Chinese Han population. (PMID: 21031016) Zhao F. … Zhou X. (Mol. Vis. 2010) 2 3
  3. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K. … Aizawa Y. (Nucleic Acids Res. 2009) 2 3
  4. A genome-wide association analysis identified a novel susceptible locus for pathological myopia at 11q24.1. (PMID: 19779542) Nakanishi H. … Matsuda F. (PLoS Genet. 2009) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for MIR100HG Gene

Sources for MIR100HG Gene

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