Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIPEPP3 Gene

Aliases for MIPEPP3 Gene

  • Mitochondrial Intermediate Peptidase Pseudogene 3 2 3 5

External Ids for MIPEPP3 Gene

Previous GeneCards Identifiers for MIPEPP3 Gene

  • GC00U932695
  • GC13P021875
  • GC13P021878

Summaries for MIPEPP3 Gene

GeneCards Summary for MIPEPP3 Gene

MIPEPP3 (Mitochondrial Intermediate Peptidase Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIPEPP3 Gene

Genomics for MIPEPP3 Gene

Regulatory Elements for MIPEPP3 Gene

Enhancers for MIPEPP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F020358 1 Ensembl ENCODE 13.1 -938.2 -938210 2.1 ZNF639 ATF1 JUN BHLHE40 INSM2 ZNF140 MNT ZEB2 ARID1B JUND MIPEPP3 ENSG00000226352 MPHOSPH8 RNU2-7P LOC105370102 MIR4499
GH13F021797 0.6 ENCODE 12.3 +499.8 499755 1.2 ZNF585B TRIM28 MIPEPP3 RN7SL766P LINC00424
GH13F020702 0.9 ENCODE 12.3 -594.9 -594917 2.4 PKNOX1 ARID4B SIN3A BMI1 ZNF48 RAD21 ZNF121 ELK1 ZNF143 HCFC1 IFT88 MIPEPP3 EEF1AKMT1 CRYL1 ENSG00000278291 GC13M020702 IL17D
GH13F022127 0.5 ENCODE 12.3 +830.8 830847 2.0 ZNF146 PKNOX1 INSM2 FEZF1 ZNF335 ZNF366 SCRT2 BHLHE40 GFI1B OVOL3 MIPEPP3 MTND3P1 ENSG00000279282
GH13F021342 0.6 Ensembl ENCODE 7.7 +46.1 46133 3.3 BCOR POLR2A ZKSCAN8 ZMYM3 KDM1A MIPEPP3 XPO4 LINC00539 GRK6P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIPEPP3 on UCSC Golden Path with GeneCards custom track

Promoters for MIPEPP3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000512699 575 2201 PKNOX1 ARID4B SIN3A DMAP1 SLC30A9 ZNF143 ZNF207 FOS KLF13 SP3

Genomic Location for MIPEPP3 Gene

Chromosome:
13
Start:
21,298,125 bp from pter
End:
21,392,923 bp from pter
Size:
94,799 bases
Orientation:
Plus strand

Genomic View for MIPEPP3 Gene

Genes around MIPEPP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIPEPP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIPEPP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIPEPP3 Gene

Proteins for MIPEPP3 Gene

Post-translational modifications for MIPEPP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIPEPP3 Gene

Domains & Families for MIPEPP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIPEPP3 Gene

Function for MIPEPP3 Gene

Phenotypes for MIPEPP3 Gene

GenomeRNAi human phenotypes for MIPEPP3:
genes like me logo Genes that share phenotypes with MIPEPP3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIPEPP3 Gene

Localization for MIPEPP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIPEPP3 Gene

Pathways & Interactions for MIPEPP3 Gene

SuperPathways for MIPEPP3 Gene

No Data Available

Interacting Proteins for MIPEPP3 Gene

Gene Ontology (GO) - Biological Process for MIPEPP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIPEPP3 Gene

Transcripts for MIPEPP3 Gene

mRNA/cDNA for MIPEPP3 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MIPEPP3 Gene

Mitochondrial intermediate peptidase pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIPEPP3 Gene

No ASD Table

Relevant External Links for MIPEPP3 Gene

GeneLoc Exon Structure for
MIPEPP3
ECgene alternative splicing isoforms for
MIPEPP3

Expression for MIPEPP3 Gene

mRNA expression in normal human tissues for MIPEPP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIPEPP3 Gene:

MIPEPP3

SOURCE GeneReport for Unigene cluster for MIPEPP3 Gene:

Hs.147563
genes like me logo Genes that share expression patterns with MIPEPP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIPEPP3 Gene

Orthologs for MIPEPP3 Gene

Evolution for MIPEPP3 Gene

ENSEMBL:
Gene Tree for MIPEPP3 (if available)
TreeFam:
Gene Tree for MIPEPP3 (if available)

No data available for Orthologs for MIPEPP3 Gene

Paralogs for MIPEPP3 Gene

No data available for Paralogs for MIPEPP3 Gene

Variants for MIPEPP3 Gene

Sequence variations from dbSNP and Humsavar for MIPEPP3 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs10161851 -- 21,324,029(+) ATAAT(A/T)GGGAA intron-variant
rs10161853 -- 21,324,100(+) TTTCC(A/G)CTCTG intron-variant
rs10162201 -- 21,324,059(+) GGTGA(A/G)ATTTT intron-variant
rs10450840 -- 21,324,356(+) TCTTT(G/T)CTCTC intron-variant
rs10450841 -- 21,324,363(+) TCTCT(C/T)CCTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIPEPP3 Gene

Variant ID Type Subtype PubMed ID
dgv1613n100 CNV gain 25217958
esv1388531 CNV insertion 17803354
esv1655888 CNV insertion 17803354
esv25813 CNV loss 19812545
esv2668027 CNV deletion 23128226
esv2759926 CNV gain 17122850
esv28175 CNV loss 19812545
esv3332613 CNV insertion 20981092
esv3451364 CNV duplication 20981092
esv34670 CNV gain 17911159
esv992961 CNV insertion 20482838
nsv1078303 OTHER inversion 25765185
nsv1120006 CNV deletion 24896259
nsv1140246 OTHER inversion 24896259
nsv1142825 CNV tandem duplication 24896259
nsv1151909 OTHER inversion 26484159
nsv519207 CNV gain 19592680
nsv561257 CNV loss 21841781
nsv818948 CNV gain 17921354
nsv9060 CNV loss 18304495
nsv974053 CNV duplication 23825009
nsv976085 CNV duplication 23825009
nsv977207 CNV duplication 23825009
nsv977208 CNV duplication 23825009

Relevant External Links for MIPEPP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIPEPP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIPEPP3 Gene

Disorders for MIPEPP3 Gene

Relevant External Links for MIPEPP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIPEPP3

No disorders were found for MIPEPP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIPEPP3 Gene

Publications for MIPEPP3 Gene

  1. Genome-wide association analyses suggest NELL1 influences adverse metabolic response to HCTZ in African Americans. (PMID: 23400010) Del-Aguila J.L. … Boerwinkle E. (Pharmacogenomics J. 2013) 3 64
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. Gene expression in proliferating human erythroid cells. (PMID: 10409428) Gubin A.N. … Miller J.L. (Genomics 1999) 3 64

Products for MIPEPP3 Gene

Sources for MIPEPP3 Gene

Content
Loading form....