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Aliases & Descriptions for MIF
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 5.3.2.1 3 | | GIF 1, 2, 3 | | GLIF 2, 3 | | MMIF 2, 3 |
| | | Descriptions |
|---|
| Glycosylation-inhibiting factor 3 | | Phenylpyruvate tautomerase 2, 3 | | macrophage migration inhibitory factor 2 | macrophage migration inhibitory factor (glycosylation-inhibiting factor) 2 |
|
| | Search outside databases for aliases for MIF genePrevious GC identifers: GC22P020896 GC22P022560 GC22P022369 |
Summaries for MIF(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for MIF: This gene encodes a lymphokine involved in cell-mediated immunity, immunoregulation, and inflammation. It plays a role in the regulation of macrophage function in host defense through the suppression of anti-inflammatory effects of glucocorticoids. This lymphokine and the JAB1 protein form a complex in the cytosol near the peripheral plasma membrane, which may indicate an additional role in integrin signaling pathways. [provided by RefSeq] UniProtKB/Swiss-Prot: MIF_HUMAN, P14174Function: The expression of MIF at sites of inflammation suggest a role for the mediator in regulating the function of macrophage in host defense. Also acts as a phenylpyruvate tautomeraseGene Wiki entry for MIF (Macrophage_migration_inhibitory_factor) |
Genomic Location for MIF
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the MIF gene 
Entrez Gene cytogenetic band: 22q11.23 Ensembl cytogenetic band: 22q11.23 HGNC cytogenetic band: 22q11.23MIF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22P022561:
(about GC identifiers)
Start:
|
22,566,565 bp from pter |
End:
|
22,567,409 bp from pter |
Size:
|
845 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011520.11
| Proteins for MIF
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: MIF_HUMAN, P14174 (See
protein sequence)Recommended Name: Macrophage migration inhibitory factor Size: 115 amino acids; 12476 Da
Subunit: Homotrimer. Interacts with COPS5 and BNIPL
PDB structures from and Proteopedia :1CA7 (3D)
 1CGQ (3D)
 1GCZ (3D)
 1GD0 (3D)
 1GIF (3D)
 1LJT (3D)
 1MIF (3D)
 1P1G (3D)
 2OOH (3D)
 2OOW (3D)
 2OOZ (3D)
 3B9S (3D)
 3CE4 (3D)
 3DJH (3D)
 3DJI (3D)
 
Secondary accessions: Q2V4Y5Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002406.1
ENSEMBL proteins: ENSP00000215754
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MIF 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for MIF: Assays for MIF: | Protein
Domains/ Families for MIF(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P14174
ProtoNet protein and cluster: P14174 1 Blocks protein family: IPB001398 Macrophage migration inhibitory factor
UniProtKB/Swiss-Prot: MIF_HUMAN, P14174Similarity: Belongs to the MIF family | Gene Function for MIF
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002415
Applied Biosystems Silencer® siRNAs for MIF
Sigma-Aldrich siRNA and siRNA Panels for MIF  Sigma-Aldrich shRNA Panels and shRNA for MIF  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002415                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002415                                  untagged cDNA clone in CMV expression vector: NM_002415 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002415
UniProtKB/Swiss-Prot: MIF_HUMAN, P14174Function: The expression of MIF at sites of inflammation suggest a role for the mediator in regulating the function of macrophage in host defense. Also acts as a phenylpyruvate tautomeraseCatalytic activity: Keto-phenylpyruvate = enol-phenylpyruvateEnzyme Number (IUBMB): EC 5.3.2.1 Genatlas biochemistry entry for MIF:macrophage migration inhibitory factor,12.3kDa,expressed in T cells and various tissues,including immunologically privileged lens and brain,also involved in mitogenic response and the control of cell cycle progression,maybe the same as DDT6 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Mif):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for MIF
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
3 Sigma-Aldrich "Your Favorite Gene" Pathways for MIF (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for MIF 
5/31 Interacting proteins for MIF (ENSP000002157543 P141741, 2) via UniProtKB, MINT, and/or STRING (see all 31
)About this table
5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
): About this table
|
Drugs & Compounds for MIF(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  | Sigma-Aldrich Small Molecules for MIF: Inhibitor |
Browse Tocris compounds for MIF 10/44 Novoseek chemical compound relationships for MIF gene (see all 44
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| d-dopachrome |
94.28 |
30 |
10079069 (3), 8900542 (2), 9443822 (2), 9716662 (2) (see all 17) |
| 5-carboxymethyl-2-hydroxymuconate |
90.77 |
9 |
10079069 (1), 10353846 (1), 10504254 (1), 9443822 (1) (see all 6) |
| l-dopachrome |
85.88 |
6 |
8900542 (1), 9794786 (1), 11032394 (1), 10504254 (1) (see all 5) |
| (e)-2-fluoro-p-hydroxycinnamate |
85.09 |
2 |
10933783 (1), 16279779 (1) |
| chmi |
85.01 |
6 |
18695941 (2), 9665726 (1), 10079069 (1) |
| 4-oxalocrotonate |
74.71 |
8 |
10079069 (1), 10353846 (1), 10504254 (1), 12382291 (1) (see all 5) |
| dopaminochrome |
60.91 |
2 |
10644007 (1), 12835099 (1) |
| dopachrome |
58.07 |
8 |
9794786 (3), 9614090 (1), 10576686 (1), 15145447 (1) |
| phenyl agarose |
56.01 |
3 |
9560321 (1), 9794786 (1) |
| hemozoin |
50.76 |
9 |
17060471 (3), 16929348 (1), 10722628 (1), 16636133 (1) |
About this table
|
Transcripts for MIF(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002415
Sigma-Aldrich siRNA and siRNA Panels for MIF  Sigma-Aldrich shRNA Panels and shRNA for MIF  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002415 REFSEQ mRNAs for MIF gene: NM_002415.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002415               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002415                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002415                                  untagged cDNA clone in CMV expression vector: NM_002415  Additional cDNA sequence: AF469046.1 AK311929.1 BC000447.2 BC007376.2 BC007676.1 BC008914.2 BC013976.2 BC022414.1 BC051440.1 BC053376.1 BT007148.1 CR407644.1 CR456520.1 CR541651.1 CR602271.1 CR606770.1 EF611126.1 L10612.1 M25639.1 M95775.1 Z23063.1 22 DOTS entries: DT.99959987 DT.100045729 DT.92458820 DT.451973 DT.97857690 DT.91661314 DT.100853589 DT.100691841 DT.100691845 DT.92458819 DT.100691852 DT.120669373 DT.120669415 DT.95202663 DT.120669428 DT.40211388 DT.120669362 DT.100691842 DT.100691847 DT.100763736 DT.91845241 DT.91878116 24/1476 AceView cDNA sequences (see all 1476
):BI252196 BQ684691 AW071866 BQ961643 BM557522 BE793353 BC007676 BU075681 CB140254 BC000447 BF111661 AI363384 R71917 AW246102 BE645161 BQ957590 CB156328 BX333470 AI671928 BE312186 BU556978 H23821 CA394825 AW163668
highest scoring ESTs for MIF:AA025719 AA027224 AA027993 AA121054 AA121539 AA127849 AA143408 AA147893 AA150737 AA156617 Unigene Cluster for MIF: Macrophage migration inhibitory factor (glycosylation-inhibiting factor) Hs.407995 [show with all ESTs]Unigene Representative Sequence: BQ056329
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for MIF
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | ^ | 3a | · | 3b | · | 3c | |
| SP1: | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | - |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for MIF
1 Ensembl transcript including schematic representation: ENST00000215754
|
Expression for MIF
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| MIF expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for MIF
1 / 2 / 3 3 probe-sets matching MIF gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AACGCGGCCA
SOURCE GeneReport for Unigene cluster: Hs.407995
Expression variation in blood from EXPOLDB for MIF |
Orthologs for MIF
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for MIF gene from 5/6 species (see all 6
)
About this table Species with no ortholog for MIF
ENSEMBL Gene Tree for MIF | Paralogs for MIF(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for MIF gene
- DDT2 DDTL2
|
SNPs/Variants for MIF(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for MIF (up to first 250kb)
|
Disorders & Mutations for MIF
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 153620 disorders: 604302 UniProtKB/Swiss-Prot: MIF_HUMAN, P14174
Genetic variations in MIF are associated with susceptibility to systemic juvenile rheumatoid arthritis [MIM:604302]. Systemic juvenile rheumatoid arthritis is juvenile chronic arthritis associated with severe, debilitating, extraarticular features, and occasionally fatal complications. Despite medical treatment, many children still experience early joint destruction, necessitating surgical replacement10/93 Novoseek disease relationships for MIF gene (see all 93
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| shock septic |
59.84 |
48 |
11397892 (4), 10655104 (3), 16125329 (3), 12792855 (2) (see all 26) |
| inflammation |
53.56 |
79 |
15659324 (4), 11673308 (3), 2260882 (2), 15225126 (2) (see all 55) |
| rheumatoid arthritis |
50.56 |
43 |
16628200 (3), 17166737 (2), 18442790 (2), 17869648 (2) (see all 31) |
| sepsis |
50.42 |
87 |
17443469 (6), 16115897 (4), 15377884 (4), 10655104 (3) (see all 31) |
| necrosis |
49.02 |
56 |
11377135 (2), 12480958 (1), 14621041 (1), 15037585 (1) (see all 50) |
| tumors |
44.96 |
214 |
18171602 (7), 12925952 (6), 15973102 (5), 15064733 (5) (see all 99) |
| arthritis |
40.52 |
21 |
18078632 (2), 11207663 (2), 16465610 (2), 12746913 (1) (see all 12) |
| glomerulonephritis |
37.28 |
14 |
11792756 (2), 10652026 (1), 11757824 (1), 11773615 (1) (see all 12) |
| hypersensitivity delayed |
37.19 |
4 |
18288453 (1), 11032394 (1), 2307508 (1), 15770393 (1) |
| systemic inflammatory response syndrome |
37.05 |
3 |
16677407 (1), 17534704 (1), 11534567 (1) |
About this table
Human Gene Mutation Database: MIF Genetic Association Database: MIF Human Genome Epidemiology Navigator: MIF (61 documents)
|
Medical News for MIF(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for MIF (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/607 PubMed articles for MIF gene (see all 607
):- A novel 5'-flanking region polymorphism of macrophage migration inhibitory factor is associated with systemic-onset juvenile idiopathic arthritis. (PubMed id 11508429)1, 3, 4, 6 Donn R.P.... Thomson W. (2001)
- Molecular cloning of a cDNA encoding a human macrophage migration inhibitory factor. (PubMed id 2552447)2, 3, 4 Weiser W.Y....David J.R. (1989)
- Molecular cloning and functional expression of a cDNA encoding glycosylation-inhibiting factor. (PubMed id 8234256)1, 3, 4 Mikayama T.... Ishii Y. (1993)
- Intracellular action of the cytokine MIF to modulate AP-1 activity and the cell cycle through Jab1. (PubMed id 11089976)1, 3, 4 Kleemann R.... Bernhagen J. (2000)
- Correlation of rheumatoid arthritis severity with the genetic functional variants and circulating levels of macrophage migration inhibitory factor. (PubMed id 16200611)1, 3, 6 Radstake T.R....van Riel P.L. (2005)
- Polymorphisms of the macrophage inhibitory factor and C-reactive protein genes in subjects with Alzheimer's dementia. (PubMed id 15286457)1, 3, 6 Flex A....Pola P. (2004)
- Macrophage migration inhibitory factor gene polymorphism is associated with psoriasis. (PubMed id 15304087)1, 3, 6 Donn R.P....Griffiths C.E. (2004)
- Macrophage migration inhibitory factor gene polymorphism is associated with sarcoidosis in biopsy proven erythema nodosum. (PubMed id 12180727)1, 3, 6 Amoli M.M....Gonzalez-Gay M.A. (2002)
- Promoter polymorphism in the macrophage migration inhibitory factor gene is associated with obesity. (PubMed id 16247506)1, 3, 6 Sakaue S....Nishimura M. (2006)
- Proinflammatory genetic profiles in subjects with history of ischemic stroke. (PubMed id 15308783)1, 3, 6 Flex A....Pola R. (2004)
|
Search for MIF
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing MIF
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing MIF
(According to HUGE)
About This Section
| -- |
Specialized Databases showing MIF(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for MIF(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for MIF:

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