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Aliases for MID1IP1-AS1 Gene

Subcategory (RNA class) for MID1IP1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MID1IP1-AS1 Gene

  • MID1IP1 Antisense RNA 1 2 3 5
  • MID1IP1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MID1IP1-AS1 Gene

Previous GeneCards Identifiers for MID1IP1-AS1 Gene

  • GC00U933498
  • GC0XM038661

Summaries for MID1IP1-AS1 Gene

GeneCards Summary for MID1IP1-AS1 Gene

MID1IP1-AS1 (MID1IP1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MID1IP1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MID1IP1-AS1 Gene

Genomics for MID1IP1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MID1IP1-AS1 Gene

Promoters and enhancers for MID1IP1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI038800 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.9 -895 8 HDGF CLOCK FOXA2 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 MID1IP1 MID1IP1-AS1 GC0XP038896
GH0XI038815 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -13.1 -13055 2.3 PKNOX1 FOXA2 NFRKB ZBTB40 ETS1 ZNF766 ELF1 ZNF592 ZNF148 SP1 MID1IP1-AS1 GC0XP038896
GH0XI038811 Enhancer 0.7 Ensembl ENCODE 0.4 -8.1 -8124 1.4 ZNF639 IRF2 ZNF687 ZNF592 MID1IP1-AS1 GC0XP038896
GH0XI038868 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 -66.3 -66300 4.4 PKNOX1 USF1 CEBPG RFX5 IRF9 FOSL1 ZNF316 TRIM24 NFE2 FOS MID1IP1 GC0XP038896 MID1IP1-AS1
GH0XI038878 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 -76.0 -75998 2.7 PKNOX1 MAX MAFG EBF1 ELF1 POLR2A IKZF1 RCOR1 ZNF24 NFE2 GC0XP038896 MID1IP1-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MID1IP1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MID1IP1-AS1 Gene

Genomic Locations for MID1IP1-AS1 Gene
chrX:38,801,248-38,803,883
(GRCh38/hg38)
Size:
2,636 bases
Orientation:
Minus strand
chrX:38,660,821-38,663,136
(GRCh37/hg19)

Genomic View for MID1IP1-AS1 Gene

Genes around MID1IP1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MID1IP1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MID1IP1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MID1IP1-AS1 Gene

Proteins for MID1IP1-AS1 Gene

Post-translational modifications for MID1IP1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MID1IP1-AS1 Gene

Domains & Families for MID1IP1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MID1IP1-AS1 Gene

Function for MID1IP1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MID1IP1-AS1 Gene

Localization for MID1IP1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MID1IP1-AS1 Gene

Pathways & Interactions for MID1IP1-AS1 Gene

SuperPathways for MID1IP1-AS1 Gene

No Data Available

Interacting Proteins for MID1IP1-AS1 Gene

Gene Ontology (GO) - Biological Process for MID1IP1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MID1IP1-AS1 Gene

Drugs & Compounds for MID1IP1-AS1 Gene

No Compound Related Data Available

Transcripts for MID1IP1-AS1 Gene

mRNA/cDNA for MID1IP1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MID1IP1-AS1 Gene

No ASD Table

Relevant External Links for MID1IP1-AS1 Gene

GeneLoc Exon Structure for
MID1IP1-AS1
ECgene alternative splicing isoforms for
MID1IP1-AS1

Expression for MID1IP1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MID1IP1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MID1IP1-AS1 Gene

This gene is overexpressed in Pancreas (x4.2).
genes like me logo Genes that share expression patterns with MID1IP1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MID1IP1-AS1 Gene

Orthologs for MID1IP1-AS1 Gene

Evolution for MID1IP1-AS1 Gene

ENSEMBL:
Gene Tree for MID1IP1-AS1 (if available)
TreeFam:
Gene Tree for MID1IP1-AS1 (if available)

No data available for Orthologs for MID1IP1-AS1 Gene

Paralogs for MID1IP1-AS1 Gene

No data available for Paralogs for MID1IP1-AS1 Gene

Variants for MID1IP1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MID1IP1-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000082079 -- 38,805,360(-) C/T upstream_transcript_variant
rs1000872613 -- 38,800,870(-) C/A downstream_transcript_variant
rs1001089223 -- 38,801,218(-) T/A downstream_transcript_variant
rs1001241052 -- 38,803,875(-) C/G non_coding_transcript_variant
rs1003116700 -- 38,801,302(-) T/G non_coding_transcript_variant

Additional Variant Information for MID1IP1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MID1IP1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MID1IP1-AS1 Gene

Disorders for MID1IP1-AS1 Gene

Additional Disease Information for MID1IP1-AS1

No disorders were found for MID1IP1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MID1IP1-AS1 Gene

Publications for MID1IP1-AS1 Gene

No publications were found for MID1IP1-AS1 Gene.

Products for MID1IP1-AS1 Gene

Sources for MID1IP1-AS1 Gene

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