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Aliases for MICD Gene

Aliases for MICD Gene

  • MHC Class I Polypeptide-Related Sequence D (Pseudogene) 2 3 5
  • MHC Class I Polypeptide-Related Sequence D, Pseudogene 2
  • MHC Class I Polypeptide-Related Sequence D 2
  • PERB11.4 3

External Ids for MICD Gene

Previous GeneCards Identifiers for MICD Gene

  • GC06U990082
  • GC06M030043
  • GC06M030046
  • GC06M029939
  • GC06M029940
  • GC06Mj29929
  • GC06M029943
  • GC06M029957
  • GC06M030026
  • GC06M030003
  • GC06M030037
  • GC06M030054
  • GC06M030134
  • GC06M030193

Summaries for MICD Gene

GeneCards Summary for MICD Gene

MICD (MHC Class I Polypeptide-Related Sequence D (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MICD Gene

Genomics for MICD Gene

Regulatory Elements for MICD Gene

Enhancers for MICD Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G029963 2 FANTOM5 Ensembl ENCODE dbSUPER 20.1 +9.5 9496 4.8 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 HLA-A HLA-K HLA-W HLA-H HLA-J HCG4P5 MICD HCG4 IFITM4P HLA-F
GH06G030100 1.7 FANTOM5 Ensembl ENCODE 17.1 -126.3 -126336 3.9 FOXA2 MLX ARNT AGO1 WRNIP1 ARID4B SIN3A DMAP1 SLC30A9 ZNF143 HLA-K RPL23AP1 TRIM31-AS1 HCG4 MICD ZNRD1ASP ETF1P1 PPP1R10 HCG18 PAIP1P1
GH06G029924 1.1 ENCODE dbSUPER 26.1 +49.7 49673 3.6 TBP MLX ARID4B DMAP1 RFX5 YY1 PCBP1 KLF11 SMAD5 CEBPB HLA-A MICD ZFP57 HLA-J HLA-H HLA-K HCG4P3 RPL23AP1 ZNRD1 HCG4
GH06G029976 1.3 ENCODE dbSUPER 19.9 -1.2 -1210 1.7 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 HLA-J HCG4P3 HLA-K ZFP57 HLA-H ZNRD1 HLA-A HCG4P7 MICD HCG4
GH06G030527 1.9 FANTOM5 Ensembl ENCODE dbSUPER 13.1 -553.3 -553286 3.5 HDGF FOXA2 PKNOX1 MLX CREB3L1 ARNT ZFP64 ARID4B SIN3A DMAP1 IER3 PRR3 MICD GNL1 HCG18 ABCF1 HLA-C TRIM39 C6orf136 PPP1R10
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MICD on UCSC Golden Path with GeneCards custom track

Promoters for MICD Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195350 -1155 1001 HDGF PKNOX1 CREB3L1 AGO1 ARID4B DMAP1 ZNF2 YY1 SLC30A9 ZNF143

Genomic Location for MICD Gene

Chromosome:
6
Start:
29,970,372 bp from pter
End:
29,975,745 bp from pter
Size:
5,374 bases
Orientation:
Minus strand

Genomic View for MICD Gene

Genes around MICD on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MICD Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MICD Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for MICD Gene

Post-translational modifications for MICD Gene

No Post-translational modifications

No data available for DME Specific Peptides for MICD Gene

Domains & Families for MICD Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MICD Gene

Function for MICD Gene

Molecular function for MICD Gene

GENATLAS Biochemistry:
MHC class I,chain-related gene D

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MICD Gene

Localization for MICD Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MICD Gene

Pathways & Interactions for MICD Gene

No Data Available

Interacting Proteins for MICD Gene

Gene Ontology (GO) - Biological Process for MICD Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MICD Gene

Drugs & Compounds for MICD Gene

No Compound Related Data Available

Transcripts for MICD Gene

mRNA/cDNA for MICD Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MICD Gene

No ASD Table

Relevant External Links for MICD Gene

GeneLoc Exon Structure for
MICD
ECgene alternative splicing isoforms for
MICD

Expression for MICD Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MICD Gene

mRNA differential expression in normal tissues according to GTEx for MICD Gene

This gene is overexpressed in Whole Blood (x13.0).

NURSA nuclear receptor signaling pathways regulating expression of MICD Gene:

MICD
genes like me logo Genes that share expression patterns with MICD: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MICD Gene

Orthologs for MICD Gene

Evolution for MICD Gene

ENSEMBL:
Gene Tree for MICD (if available)
TreeFam:
Gene Tree for MICD (if available)

No data available for Orthologs for MICD Gene

Paralogs for MICD Gene

No data available for Paralogs for MICD Gene

Variants for MICD Gene

Relevant External Links for MICD Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MICD

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MICD Gene

Disorders for MICD Gene

Relevant External Links for MICD

Genetic Association Database (GAD)
MICD
Human Genome Epidemiology (HuGE) Navigator
MICD

No disorders were found for MICD Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MICD Gene

Publications for MICD Gene

  1. A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01. (PMID: 20593013) Cree B.A. … . (PLoS ONE 2010) 3 46 64
  2. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 2 3 64
  3. A second lineage of mammalian major histocompatibility complex class I genes. (PMID: 8022771) Bahram S. … Spies T. (Proc. Natl. Acad. Sci. U.S.A. 1994) 2 3 64
  4. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with BehAset's disease. (PMID: 20622878) Remmers E.F. … GA1l A. (Nat. Genet. 2010) 46 64

Products for MICD Gene

Sources for MICD Gene

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