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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MGST1 Gene

protein-coding   GIFtS: 66
GCID: GC12P016500

microsomal glutathione S-transferase 1


(Previous symbol: GST12)
 Explore 22 diseases affiliated with
MGST1 via our new
 Human Malady Compendium 
Biological research products
for MGST1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Microsomal Glutathione S-Transferase 11 2     Microsomal GST-I2 3
GST121 2 3 5     MGST2 3
MGST-I1 2     EC 2.5.1.183 8
Microsomal GST-12 3     Glutathione S-Transferase 122

External Ids:    HGNC: 70611   Entrez Gene: 42572   Ensembl: ENSG000000083947   OMIM: 1383305   UniProtKB: P106203   

Export aliases for MGST1 gene to outside databases

Previous GC identifers: GC12P016240 GC12P016644 GC12P016400 GC12P016391


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MGST1:
The MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism) family consists of six human
proteins, two of which are involved in the production of leukotrienes and prostaglandin E, important mediators of
inflammation. Other family members, demonstrating glutathione S-transferase and peroxidase activities, are involved in
cellular defense against toxic, carcinogenic, and pharmacologically active electrophilic compounds. This gene encodes
a protein that catalyzes the conjugation of glutathione to electrophiles and the reduction of lipid hydroperoxides.
This protein is localized to the endoplasmic reticulum and outer mitochondrial membrane where it is thought to protect
these membranes from oxidative stress. Several transcript variants, some non-protein coding and some protein coding,
have been found for this gene. (provided by RefSeq, May 2012)

UniProtKB/Swiss-Prot: MGST1_HUMAN, P10620
Function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.
Has a wide substrate specificity

Gene Wiki entry for MGST1 (Microsomal glutathione S-transferase 1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_009714.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MGST1 gene promoter:
         HFH-3   FOXI1   POU2F1   POU2F1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): MGST1 promoter sequence
   Search SABiosciences Chromatin IP Primers for MGST1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MGST1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12p12.3-p12.1   Ensembl cytogenetic band:  12p12.3   HGNC cytogenetic band: 12p12.3-p12.1

MGST1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MGST1 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12P016500:  view genomic region     (about GC identifiers)

Start:
16,500,076 bp from pter      End:
16,762,193 bp from pter
Size:
262,118 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MGST1_HUMAN, P10620 (See protein sequence)
Recommended Name: Microsomal glutathione S-transferase 1  
Size: 155 amino acids; 17599 Da
Subunit: Homotrimer; The trimer binds only one molecule of glutathione (By similarity)
Subcellular location: Microsome (By similarity). Mitochondrion outer membrane; Peripheral membrane protein (By
similarity). Endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity)
Secondary accessions: A8K533 G5EA53
Alternative splicing: 2 isoforms:  P10620-1   P10620-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for MGST1: NX_P10620

Post-translational modifications:

  • Peroxynitrite induces nitration at Tyr-93 which activates the enzyme (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P10620

  • 3 DME Specific Peptides for MGST1 (P10620)
     KVFANPEDC  PFLGIGLLYSLSGPD  ARIYHTIAYLTPLPQPNR 

    MGST1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (7 alternative transcripts): 
    NP_001247440.1  NP_001247441.1  NP_001254527.1  NP_064696.1  NP_665707.1  NP_665734.1  NP_665735.1  

    ENSEMBL proteins: 
     ENSP00000442557   ENSP00000442767   ENSP00000379513   ENSP00000438308   ENSP00000437988  
     ENSP00000442970   ENSP00000440443   ENSP00000379510   ENSP00000010404   ENSP00000379512  
    Reactome Protein details: P10620
    Human Recombinant Protein Products: 
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    Uscn Proteins for MGST1

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005739mitochondrion IDA--
    GO:0005741mitochondrial outer membrane IEA--
    GO:0005743mitochondrial inner membrane IEA--
    GO:0005778peroxisomal membrane ISS--


    MGST1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MGST1 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR023352 MAPEG-like_dom
     IPR001129 Membr-assoc_MAPEG

    Graphical View of Domain Structure for InterPro Entry P10620

    ProtoNet protein and cluster: P10620

    1 Blocks protein family: IPB001129 Membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG)

    UniProtKB/Swiss-Prot: MGST1_HUMAN, P10620
    Similarity: Belongs to the MAPEG family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MGST1_HUMAN, P10620
    Function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.
    Has a wide substrate specificity
    Catalytic activity: RX + glutathione = HX + R-S-glutathione
    Enzyme regulation: Can be activated by reagents that attack Cys-50 sulfhydryl, such as N-ethylmaleimide. Activation
    also occurs via nitration of Tyr-93 by peroxynitrite (By similarity)

         Genatlas biochemistry entry for MGST1:
    microsomal glutathione-S-transferase 1,microsomal,GST superfamily,expressed in the liver and several other tissues

    Enzyme Number (IUBMB): EC 2.5.1.181 2

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    SwitchGear 3'UTR luciferase reporter plasmidMGST1 3' UTR sequence
    Inhib. RNA
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MGST1

    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004364glutathione transferase activity IDA--
    GO:0004602glutathione peroxidase activity IDA--
    GO:0005515protein binding IPI--
    GO:0016740transferase activity ----
    GO:0042802identical protein binding ----


    MGST1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for MGST1:
     Decreased nuclei size in G2M 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Glutathione metabolism
    Glutathione metabolism1.00
    glutathione-mediated detoxification I0.53
    Glutathione metabolism0.92
    Glutathione conjugation0.50
    Glutathione metabolism0.70
    2Biological oxidations
    Biological oxidations1.00
    metapathway biotransformation0.41
    Phase II conjugation0.52
    3Drug metabolism - cytochrome P450
    Drug metabolism - cytochrome P4501.00
    Metabolism of xenobiotics by cytochrome P4500.73
    4Metabolism
    Metabolism1.00
    5Oxidative Stress
    Oxidative Stress1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for MGST1
        Glutathione metabolism


    1 GeneGo (Thomson Reuters) Pathway for MGST1
        Glutathione metabolism

    3 BioSystems Pathways for MGST1 
        glutathione-mediated detoxification I
    metapathway biotransformation
    Oxidative Stress

    4        Reactome Pathways for MGST1
        Metabolism
    Biological oxidations
    Glutathione conjugation
    Phase II conjugation


    3         Kegg Pathways  (Kegg details for MGST1):
        Glutathione metabolism
    Metabolism of xenobiotics by cytochrome P450
    Drug metabolism - cytochrome P450


    MGST1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MGST1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/64 Interacting proteins for MGST1 (P106201, 3 ENSP000000104044) via UniProtKB, MINT, STRING, and/or I2D (see all 64)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    COBRA1Q8WX921, 3EBI-2691601,EBI-347721 I2D: score=1 
    NELFBQ8WX921, 3EBI-2691601,EBI-347721 I2D: score=1 
    LTC4SQ168733, ENSP000002925964I2D: score=1 STRING: ENSP00000292596
    ADH7ENSP000002096654STRING: ENSP00000209665
    CYP1A1ENSP000003690504STRING: ENSP00000369050
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006749glutathione metabolic process IEA--
    GO:0006805xenobiotic metabolic process TAS--
    GO:0010243response to organic nitrogen IEA--
    GO:0032496response to lipopolysaccharide IEA--
    GO:0033327Leydig cell differentiation IEA--


    MGST1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    MGST1 for compounds           About GeneDecksing

    EMD Millipore small molecules for MGST1:
    Small Molecule - inhibitor
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    10/12 HMDB Compounds for MGST1 (see all 12)    About this table
    CompoundSynonyms CAS #PubMed Ids
    2-Hydroxyestrone-1-S-glutathione2,3-dihydroxy-1,3,5[10]-estratriene-17-one-1-S-glutathione;2-hydroxyestrone-1-S-glutathione ----
    2-Hydroxyestrone-4-S-glutathione2,3-dihydroxy-1,3,5[10]-estratriene-17-one-4-S-glutathione ----
    4-Hydroxyestrone-2-S-glutathione3,4-dihydroxy-1,3,5[10]-estratriene-17-one-2-S-glutathione ----
    Adrenochromeadrenochrome oxidised;adrenochrome O-quinone;N-methyl-5,6-dioxo-2,3,5,6-tetrahydro-3-hydroxyindole;N-methyl-5,6-dioxo-2,3,5,6-tetrahydro-3-indolol;AdChr 54-06-8--
    Estrone-2,3-quinonecatecholestrogen quinone 40551-33-5--
    Estrone-3,4-quinonecatecholestrogen quinone 633-34-1--
    Glutathione5-L-Glutamyl-L-cysteinylglycine (see all 32)70-18-8--
    Hydrochloric acidHydrogen chloride anhydrous [UN1050] [Poison gas] (see all 16)7647-01-0--
    Noradrenochromenoradrenochrome O-quinone;noradrenochrome oxidised;5,6-dioxo-2,3,5,6-tetrahydro-3-hydroxyindole;5,6-dioxo-2,3,5,6-tetrahydro-3-indolol;AdChr 490-89-1--
    S-(PGJ2)-glutathioneGSPGJ2;9-(S-glutathionyl)-prostaglandin J(,2) ----

    1 DrugBank Compound for MGST1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Glutathione5-L-Glutamyl-L-cysteinylglycine (see all 5)70-18-8target--17306223 17297922

    10/14 Novoseek chemical compound relationships for MGST1 gene (see all 14)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    gsts 78 3 15607001 (1), 9230064 (1), 17982697 (1)
    1-chloro-24-dinitrobenzene 68.1 2 9177297 (1), 15236595 (1)
    n-ethylmaleimide 62.5 3 15013818 (1), 15236595 (1)
    ltc4 54.9 3 11322876 (2), 9230064 (1)
    chlorambucil 42.2 1 16920737 (1)
    epoxide 41.6 1 11048672 (1)
    cysteine 21.2 5 14527828 (1), 17645877 (1), 9177297 (1), 15366924 (1)
    nadph 16.7 4 15013818 (3), 19428324 (1)
    estrogen 7.07 1 17982697 (1)
    tyrosine 0 2 10673221 (1), 12532421 (1)

    Search CenterWatch for drugs/clinical trials and news about MGST1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MGST1 gene (7 alternative transcripts): 
    NM_001260511.1  NM_001260512.1  NM_001267598.1  NM_020300.4  NM_145764.2  NM_145791.2  NM_145792.2  

    Unigene Cluster for MGST1:

    Microsomal glutathione S-transferase 1
    Hs.389700  [show with all ESTs]
    Unigene Representative Sequence: AK123482
    18/19 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 19):
    ENST00000536371 ENST00000534835 ENST00000543076 ENST00000396210(uc001rdg.3)
    ENST00000539036 ENST00000537878 ENST00000542256(uc009zih.1) ENST00000539708
    ENST00000535309 ENST00000540056 ENST00000540126 ENST00000538885 ENST00000396207(uc001rdi.3)
    ENST00000538857 ENST00000535624 ENST00000395815 ENST00000359720 ENST00000010404(uc001rdf.3)


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    Additional cDNA sequence: 

    AK123482.1 AK291148.1 AK309707.1 BC005923.1 BC056863.1 BC062473.1 BT006982.1 CR407629.1 
    J03746.1 NR_048545.1 NR_048547.1 

    21 DOTS entries:

    DT.99937813  DT.100888209  DT.40255485  DT.91768506  DT.100888213  DT.100031556  DT.100888207  DT.121188419 
    DT.91995994  DT.121188368  DT.309711  DT.91768505  DT.101985177  DT.100693190  DT.121188425  DT.92025874 
    DT.121188361  DT.91833202  DT.91985767  DT.121188372  DT.91914092 

    24/653 AceView cDNA sequences (see all 653):

    AW148701 AU128622 BU688561 BQ000282 BM993042 AV656557 BM981349 CA444712 
    CA435976 NM_145791 CB116771 BQ436421 CD368596 BQ676238 AA120994 BQ717643 
    CB143860 CB528319 NM_145792 BM840050 AU126584 BE003712 R01853 BU683344 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for MGST1 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6a · 6b · 6c · 6d
    SP1:              -     -                 -                                 
    SP2:                                      -                                 
    SP3:                                -     -                                 
    SP4:              -     -                 -     -                           
    SP5:                                                                        


    ECgene alternative splicing isoforms for MGST1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MGST1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAATAAAGAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    MGST1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    10/15 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 15
    Tissue Anatomical Compartment CellCategory (developmental path)
    Gut TubeHindgutHindgut Endoderm CellsEndoderm
    Gut TubeMidgutMidgut Endoderm CellsEndoderm
    LimbZeugopodMesenchymal Condensate CellsBone, Cartilage
    LimbZeugopodPrechondrocytic Mesenchymal CellsBone, Cartilage
    BrainHypothalamusBrain
    BrainMedulla OblongataBrain
    Gut TubeHindgutGut Tube
    Gut TubeMidgutGut Tube
    LiverLiver LobuleLiver
    LungTracheaLung
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 3 LifeMap Cells 
    NameCategory
    Sclerotome cells (Primary Cell)Bone, Cartilage, Somite
    N2/LSB/S/F8/CHIR-induced cells (Generation of midbra...)
    Ventral/hypothalamic-like neurons (Generation of midbra...)

    See MGST1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MGST1

    SOURCE GeneReport for Unigene cluster: Hs.389700

    UniProtKB/Swiss-Prot: MGST1_HUMAN, P10620
    Tissue specificity: Highly expressed in liver

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for MGST1 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Mgst11 , 5 microsomal glutathione S-transferase 11, 5 79.35(n)1
    82.58(a)1
      6 (68.40 cM)5
    566151  NM_019946.41  NP_064330.21 
     1381403165 
    chicken
    (Gallus gallus)
    Aves MGST11 microsomal glutathione S-transferase 1 72.47(n)
    67.74(a)
      418178  NM_001135550.1  NP_001129022.1 
    lizard
    (Anolis carolinensis)
    Reptilia MGST16
    --
    59(a)
    1 ↔ 1
    GL343336.1(662535-665313)
    zebrafish
    (Danio rerio)
    Actinopterygii mgst11 microsomal glutathione S-transferase 1 57.36(n)
    57.14(a)
      449784  NM_001005957.1  NP_001005957.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Mgstl1 Microsomal glutathione S-transferase-like 51.77(n)
    48.23(a)
      44110  NM_079957.3  NP_524696.2 


    ENSEMBL Gene Tree for MGST1 (if available)
    TreeFam Gene Tree for MGST1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for MGST1 gene
    PTGES2  
    1 SIMAP similar gene for MGST1 using alignment to 7 protein entries:     MGST1_HUMAN (see all proteins):
    PTGES

    MGST1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/688 NCBI SNPs in MGST1 are shown (see all 688    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs108463321,2
    C,F,A,--16498097(+) GTTTTA/GAAAAC 1 -- us2k17Minor allele frequency- G:0.36WA NA EA 366
    rs1167235961,2
    F,--16498154(+) TTCTAA/GTTTGA 1 -- us2k11Minor allele frequency- G:0.02WA 118
    rs1479440881,2
    --16498169(+) CTGAAC/TAGTCT 1 -- us2k10--------
    rs756456451,2
    C,--16498176(+) TCTGC-/TTTTTT 1 -- us2k10--------
    rs1842866791,2
    --16498466(+) TGTCAA/GTTATT 1 -- us2k10--------
    rs1174505221,2
    --16498481(+) AACTTT/CTACCT 1 -- us2k11Minor allele frequency- C:0.01NA 120
    rs1901089051,2
    --16498492(+) GTTACC/TGCCCT 1 -- us2k10--------
    rs124261251,2
    H--16498496(+) CCGCCC/GTAGTT 1 -- us2k14Minor allele frequency- G:0.00NS EA 418
    rs1418675701,2
    --16498543(+) CTTTCC/TTTCCA 1 -- us2k10--------
    rs1822136691,2
    --16498621(+) AGCTCC/TTTGAC 6 -- us2k10--------

    HapMap Linkage Disequilibrium report for MGST1 (16500076 - 16750076 bp, first 250kb of MGST1)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for MGST1: --

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MGST1 for disorders           About GeneDecksing

    OMIM gene information: 138330    OMIM disorders: --

    20/22 diseases for MGST1 (see all 22):    About MalaCards
    megalencephalic leukoencephalopathy with subcortical cysts    age related macular degeneration    diabetic macular edema    macular degeneration
    primary biliary cirrhosis    exfoliation syndrome    bronchogenic carcinoma    basal cell carcinoma
    hereditary pancreatitis    laryngitis    laryngeal carcinoma    parkinson's disease
    cataract    pancreatitis    endometriosis    carcinoma
    pancreatic cancer    colorectal cancer    breast cancer    sarcoma

    4 Novoseek disease relationships for MGST1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    carcinoma squamous cell 0 1 12532421 (1)
    inflammation 0 2 18786635 (2)
    tumors 0 1 15645424 (1)
    cancer 0 1 18333132 (1)

    Genetic Association Database (GAD): MGST1
    Human Genome Epidemiology (HuGE) Navigator: MGST1 (6 documents)

    Export disorders for MGST1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MGST1 gene, integrated from 9 sources (see all 92):
    (articles sorted by number of sources associating them with MGST1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Genetic analysis of the glutathione s-transferase genes MGST1, GSTM3, GSTT1, and GSTM1 in patients with hereditary pancreatitis. (PubMed id 15338373)1, 4, 9 Schneider A....Whitcomb D.C. (2004)
    2. Structural organization of the human microsomal glutathione S- transferase gene (GST12). (PubMed id 8812420)1, 2, 9 Kelner M.J.... Montoya M.A. (1996)
    3. Functional candidate genes in age-related macular degeneration: significant association with VEGF, VLDLR, and LRP6. (PubMed id 16384981)1, 4, 9 Haines J.L....Pericak-Vance M.A. (2006)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Microsomal GST-I: genomic organization, expression, and alternative splicing of the human gene. (PubMed id 10524215)1, 2 Lee S.H. and DeJong J. (1999)
    6. Gene expression of rat and human microsomal glutathione S- transferases. (PubMed id 3372534)1, 2 Dejong J.L.... Tu C.-P.D. (1988)
    7. Structural organization of the microsomal glutathione S-transferase gene (MGST1) on chromosome 12p13.1-13.2. Identification of the correct promoter region and demonstration of transcriptional regulation in response to oxidative stress. (PubMed id 10777602)1, 9 Kelner M.J....Morgenstern R. (2000)
    8. Catalog of 46 single-nucleotide polymorphisms (SNPs) in the microsomal glutathione S-transferase 1 (MGST1) gene. (PubMed id 11587073)1, 9 Iida A....Nakamura Y. (2001)
    9. Protection of cells from oxidative stress by microsomal glutathione transferase 1. (PubMed id 17306223)7, 9 Siritantikorn A....Morgenstern R. (2007)
    10. Age-related transcription levels of KU70, MGST1 and B IK in CD34+ hematopoietic stem and progenitor cells. (PubMed id 17714764)1, 9 Prall W.C....Aivado M. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 4257 HGNC: 7061 AceView: MGST1 Ensembl:ENSG00000008394 euGenes: HUgn4257
    ECgene: MGST1 Kegg: 4257 H-InvDB: MGST1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MGST1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for MGST1 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/mgst1/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MGST1 gene:
    Search GeneIP for patents involving MGST1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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