 |
 | Services
| |
 |
Aliases & Descriptions for MGMT
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.1.1.63 3 | | O-6-methylguanine-DNA-alkyltransferase 3 | | OTTHUMP00000020741 2 |
| | | Descriptions |
|---|
| 6-O-methylguanine-DNA methyltransferase 3 | | O-6-methylguanine-DNA methyltransferase 2 | | O6-methylguanine-DNA methyltransferase 2 | | methylguanine-DNA methyltransferase 2 |
|
| | Search outside databases for aliases for MGMT genePrevious GC identifers: GC10P130078 GC10P130307 GC10P131195 GC10P130739 GC10P130808 |
Summaries for MGMT(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: MGMT_HUMAN, P16455Function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivatedGene Wiki entry for MGMT (O-6-methylguanine-DNA_methyltransferase) |
Genomic Location for MGMT
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the MGMT gene 
Entrez Gene cytogenetic band: 10q26 Ensembl cytogenetic band: 10q26.3 HGNC cytogenetic band: 10q26MGMT Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P131155:
(about GC identifiers)
Start:
|
131,155,456 bp from pter |
End:
|
131,455,358 bp from pter |
Size:
|
299,903 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000010.9 NT_008818.15
| Proteins for MGMT
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: MGMT_HUMAN, P16455 (See
protein sequence)Recommended Name: Methylated-DNA--protein-cysteine methyltransferase Size: 207 amino acids; 21646 Da
Cofactor: Binds 1 zinc ion
Subcellular location: Nucleus
PDB structures from and Proteopedia :1EH6 (3D)
 1EH7 (3D)
 1EH8 (3D)
 1QNT (3D)
 1T38 (3D)
 1T39 (3D)
 1YFH (3D)
 
Secondary accessions: Q5VY78Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002403.2
ENSEMBL proteins: ENSP00000302111
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for MGMT: Assays for MGMT: | Protein
Domains/ Families for MGMT(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P16455
ProtoNet protein and cluster: P16455 1 Blocks protein family: IPB001497 Methylated-DNA-[protein]-cysteine S-methyltransferase
UniProtKB/Swiss-Prot: MGMT_HUMAN, P16455Similarity: Belongs to the MGMT family | Gene Function for MGMT
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002412
Applied Biosystems Silencer® siRNAs for MGMT
Sigma-Aldrich siRNA and siRNA Panels for MGMT  Sigma-Aldrich shRNA Panels and shRNA for MGMT  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002412                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002412                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002412 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002412
UniProtKB/Swiss-Prot: MGMT_HUMAN, P16455Function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivatedCatalytic activity: DNA (containing 6-O-methylguanine) + protein L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteineEnzyme Number (IUBMB): EC 2.1.1.63 Genatlas biochemistry entry for MGMT:O6-methylguanine-DNA-methyltransferase6 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Mgmt):
5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for MGMT
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/9 Sigma-Aldrich "Your Favorite Gene" Pathways for MGMT (Your Favorite Gene powered by Ingenuity) (see all 9
) 
Gene Network CentralTM Interacting Genes and Proteins Network for MGMT 
5/54 Interacting proteins for MGMT (ENSP000003021113) via UniProtKB, MINT, and/or STRING (see all 54
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for MGMT(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  | Sigma-Aldrich Small Molecules for MGMT: Inhibitor |
Browse Tocris compounds for MGMT 10/41 Novoseek chemical compound relationships for MGMT gene (see all 41
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| o6-methylguanine |
97.14 |
377 |
12449729 (6), 8366118 (4), 9422728 (4), 9875292 (3) (see all 99) |
| chloroethylnitrosourea |
90.03 |
91 |
10352868 (6), 10454526 (5), 8900378 (5), 8993023 (3) (see all 21) |
| chloroethyl nitrosoureas |
89.67 |
54 |
8393842 (3), 1518162 (2), 7558444 (2), 8605218 (2) (see all 19) |
| o(6)-benzyl-2'-deoxyguanosine |
86.63 |
17 |
8797031 (5), 8044784 (2), 10589786 (1), 8616853 (1) (see all 6) |
| lomeguatrib |
84.84 |
19 |
19367283 (3), 17500047 (3), 17577032 (3), 15486188 (1) (see all 7) |
| nitrosourea |
83.28 |
20 |
15853207 (2), 9779706 (1), 11778552 (1), 15455376 (1) (see all 13) |
| mnng |
71.84 |
35 |
1875945 (4), 1657427 (4), 8033107 (3), 7605582 (2) (see all 13) |
| n-methyl-n'-nitrosourea |
70.97 |
20 |
17507295 (2), 15870882 (2), 2320583 (1), 10439048 (1) (see all 7) |
| o-4-methylthymine |
70.36 |
3 |
8276875 (2) |
| hecnu |
69.63 |
3 |
1657427 (1), 8621235 (1) |
About this table
1 PharmGKB drug compound relationship for MGMT gene
| Drug compound |
PharmGKB Relations |
PubMed IDs for articles supporting these relationships |
| carmustine | PD   | 11229339 | About this table
|
Transcripts for MGMT(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002412
Sigma-Aldrich siRNA and siRNA Panels for MGMT  Sigma-Aldrich shRNA Panels and shRNA for MGMT  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002412 REFSEQ mRNAs for MGMT gene: NM_002412.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002412               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002412                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002412                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002412  Additional cDNA sequence: AK293593.1 BC000824.1 BT006714.1 CR599817.1 CR602497.1 CR618411.1 M29971.1 M31767.1 M60761.1 X54228.1 7 DOTS entries: DT.455458 DT.91694817 DT.75113319 DT.100781623 DT.121244429 DT.91969540 DT.95073525 24/139 AceView cDNA sequences (see all 139
):CR602497 BU737340 BU947266 BQ072274 BG183775 BI520938 BU786059 CR599817 BM758658 CF130478 BI771279 BU845865 AU102451 AL520114 BX102721 BQ641434 AU098362 BU172662 BG764104 CB992752 CR618411 BU616455 CB993639 AL524961
highest scoring ESTs for MGMT:M31767 AA126722 AA531469 AA677158 AA862955 AA948354 AA978354 AI040746 AI052155 AI057145 Unigene Cluster for MGMT: O-6-methylguanine-DNA methyltransferase Hs.501522 [show with all ESTs]Unigene Representative Sequence: CR618411
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000306010
|
Expression for MGMT
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| MGMT expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for MGMT
1 / 2 / 3 4 probe-sets matching MGMT gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AAGGCCACCG
SOURCE GeneReport for Unigene cluster: Hs.501522
Expression variation in blood from EXPOLDB for MGMT |
Orthologs for MGMT
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for MGMT gene from 5/9 species (see all 9
)
About this table Species with no ortholog for MGMT
ENSEMBL Gene Tree for MGMT | Paralogs for MGMT(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for MGMT(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for MGMT (up to first 250kb)
|
Disorders & Mutations for MGMT
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 156569
10/94 Novoseek disease relationships for MGMT gene (see all 94
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| glioblastoma |
84.58 |
173 |
19100509 (6), 19224454 (5), 18695875 (4), 18647495 (4) (see all 79) |
| glioma |
78.17 |
218 |
15363200 (7), 15297393 (6), 18580490 (6), 1893534 (5) (see all 83) |
| microsatellite instability |
74.97 |
24 |
17342321 (3), 12763209 (1), 17971589 (1), 15888787 (1) (see all 16) |
| glioblastoma multiforme |
74.52 |
29 |
17473190 (3), 15455376 (2), 17721049 (2), 18400046 (2) (see all 17) |
| tumors |
73.74 |
886 |
10404091 (7), 7729942 (6), 11297257 (6), 10029064 (6) (see all 99) |
| malignant glioma |
72.98 |
39 |
16849758 (5), 17166381 (4), 17691113 (2), 1501894 (2) (see all 16) |
| oligodendroglioma |
70.69 |
23 |
16116609 (3), 11907807 (2), 17332285 (2), 7627911 (2) (see all 15) |
| oligodendroglial tumors |
69.89 |
12 |
16038527 (3), 15455350 (3), 16116609 (2), 19333441 (1) (see all 6) |
| anaplastic astrocytoma |
69.84 |
16 |
9779706 (2), 17721049 (2), 15455376 (1), 7549044 (1) (see all 13) |
| brain tumors |
68.68 |
77 |
1518162 (4), 12503076 (4), 8393842 (3), 7729942 (3) (see all 33) |
About this table
1 PharmGKB disease relationship for MGMT gene
| Disease |
PharmGKB Relations |
PubMed IDs for articles supporting these relationships |
| Glioma | PD   | 11229339 | About this table
Human Gene Mutation Database: MGMT Genetic Association Database: MGMT Human Genome Epidemiology Navigator: MGMT (66 documents)
|
Medical News for MGMT(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for MGMT (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/921 PubMed articles for MGMT gene (see all 921
):- Lack of association between Caucasian lung cancer risk and O6-methylguanine-DNA methyltransferase-codon 178 genetic polymorphism. (PubMed id 15140540)1, 3, 6 Yang M....Kadlubar F.F. (2004)
- A genotype of the polymorphic DNA repair gene MGMT is associated with de novo glioblastoma. (PubMed id 14669534)1, 3, 6 Inoue R....Kobayashi H. (2003)
- Polymorphisms in TDG and MGMT genes - epidemiological and functional study in lung cancer patients from Poland. (PubMed id 15225156)1, 3, 6 Krzesniak M....Rusin M. (2004)
- Exon 3 polymorphisms and haplotypes of O6-methylguanine-DNA methyltransferase and risk of bladder cancer in southern China: a case-control analysis. (PubMed id 15885889)1, 3, 6 Li C....Zhang Z. (2005)
- Molecular features of adult glioma associated with patient race/ethnicity, age, and a polymorphism in O6-methylguanine-DNA-methyltransferase. (PubMed id 16030116)1, 3, 6 Wiencke J.K....Wrensch M. (2005)
- DNA repair polymorphisms and risk of colorectal adenomatous or hyperplastic polyps. (PubMed id 16284370)1, 3, 6 Bigler J....Potter J.D. (2005)
- Genetic polymorphisms and susceptibility to esophageal cancer among Chinese population (review). (PubMed id 12883749)1, 3, 6 Xing D....Lin D. (2003)
- Novel O6-methylguanine-DNA methyltransferase SNPs: a frequency comparison of patients with familial melanoma and healthy individuals in Sweden. (PubMed id 12402349)1, 3, 6 Egyhazi S....Ringborg U. (2002)
- Specificities of human, rat and E. coli O6-methylguanine-DNA methyltransferases towards the repair of O6-methyl and O6-ethylguanine in DNA. (PubMed id 8202360)1, 3, 4 Liem L.-K.... Li B.F.L. (1994)
- cDNA cloning and chromosomal assignment of the human O6- methylguanine-DNA methyltransferase. cDNA expression in Escherichia coli and gene expression in human cells. (PubMed id 2188979)1, 3, 4 Rydberg B.... Karran P. (1990)
|
Search for MGMT
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing MGMT
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing MGMT
(According to HUGE)
About This Section
| -- |
Specialized Databases showing MGMT(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for MGMT(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for MGMT:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for MGMT  |
| | Recombinant Proteins (MGMT) | | Antibodies (MGMT) |
| | | Search Tocris compounds for MGMT |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|