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Aliases for MGC72080 Gene

Aliases for MGC72080 Gene

  • MGC72080 Pseudogene 3

External Ids for MGC72080 Gene

Previous GeneCards Identifiers for MGC72080 Gene

  • GC07M097243
  • GC07M097434
  • GC07M097596
  • GC07M096918
  • GC07M097600

Summaries for MGC72080 Gene

GeneCards Summary for MGC72080 Gene

MGC72080 (MGC72080 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC72080 Gene

Genomics for MGC72080 Gene

Regulatory Elements for MGC72080 Gene

Genomic Location for MGC72080 Gene

Start:
97,966,596 bp from pter
End:
97,972,326 bp from pter
Size:
5,731 bases
Orientation:
Minus strand

Genomic View for MGC72080 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MGC72080 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC72080 Gene

Proteins for MGC72080 Gene

Post-translational modifications for MGC72080 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC72080 Gene

Domains for MGC72080 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC72080 Gene

Function for MGC72080 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MGC72080 Gene

Localization for MGC72080 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC72080 Gene

Pathways for MGC72080 Gene

SuperPathways for MGC72080 Gene

No Data Available

Interacting Proteins for MGC72080 Gene

Gene Ontology (GO) - Biological Process for MGC72080 Gene

None

No data available for Pathways by source for MGC72080 Gene

Transcripts for MGC72080 Gene

Unigene Clusters for MGC72080 Gene

MGC72080 pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MGC72080

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for MGC72080
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MGC72080 Gene

No ASD Table

Relevant External Links for MGC72080 Gene

GeneLoc Exon Structure for
MGC72080

Expression for MGC72080 Gene

mRNA expression in normal human tissues for MGC72080 Gene

mRNA expression in normal human tissues for MGC72080 Gene

SOURCE GeneReport for Unigene cluster for MGC72080 Gene Hs.655977

genes like me logo Genes that share expressions with MGC72080: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MGC72080 Gene

Orthologs for MGC72080 Gene

No data available for Orthologs and Evolution for MGC72080 Gene

Paralogs for MGC72080 Gene

No data available for Paralogs for MGC72080 Gene

Variants for MGC72080 Gene

Sequence variations from dbSNP and Humsavar for MGC72080 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1054430 -- 97,966,633(-) CACCC(G/T)CTATA nc-transcript-variant
rs1054436 -- 97,966,523(-) TACAA(A/G)TGACC intron-variant
rs2005752 -- 97,967,266(-) TTGAA(C/T)CTAGT intron-variant
rs2894158 -- 97,966,630(+) TGATA(C/T)AGCGG nc-transcript-variant
rs3735259 -- 97,972,259(+) TCCCG(A/G)CCGGG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MGC72080 Gene

Variant ID Type Subtype PubMed ID
nsv428178 CNV Gain 18775914
dgv2118e1 CNV Complex 17122850
esv32764 CNV Loss 17666407

Relevant External Links for MGC72080 Gene

HapMap Linkage Disequilibrium report
MGC72080

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MGC72080 Gene

Disorders for MGC72080 Gene

No disorders were found for MGC72080 Gene.

No data available for UniProtKB/Swiss-Prot for MGC72080 Gene

Publications for MGC72080 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MGC72080 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MGC72080
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MGC72080
    • Block miRNA regulation of MGC72080 using miScript Target Protectors

    Sources for MGC72080 Gene

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