Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 



MGC57346 Gene

RNA gene   GIFtS: 18
GCID: GC17P043734

Uncharacterized LOC401884


  Try our

disease database 

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus

Subcategory (RNA class): ncRNA

Quality score for this RNA gene is 1

Aliases
Uncharacterized LOC4018842

External Ids:    Entrez Gene: 4018842   

Export aliases for MGC57346 gene to outside databases

Previous GC identifers: GC17P041054 GC17P043698 GC17P043705


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus

GeneCards Summary for MGC57346 Gene:
MGC57346 is an RNA gene, and is affiliated with the ncRNA class.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus
RefSeq DNA sequence at NCBI GenBank:
NC_000017.10  NC_018928.2  NT_010783.16  NT_167251.2  NT_187663.1  
Regulatory elements:
   Regulatory transcription factor binding sites in the MGC57346 gene promoter:
         p53   GCNF-1   GCNF   GCNF-2   Pax-4a   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for MGC57346

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MGC57346


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q21.31   

MGC57346 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MGC57346 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P043734:  view genomic region     (about GC identifiers)

Start:
43,697,712 bp from pter      End:
43,715,329 bp from pter
Size:
17,618 bases      Orientation:
plus strand
MGC57346 has overlapping exons with:
CRHR1-IT1
ORGUL member locations:
Legend (see complete legend)

ORGUL Member Locations for MGC57346

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
About This Section

TryGeneCards Plus

UniProtKB: --


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

TryGeneCards Plus
  --

(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus

Animal Models:
   genOway: Develop your customized and physiologically relevant rodent model for MGC57346

miRNA
Products:
    
Block miRNA regulation of human, mouse, rat MGC57346 using miScript Target Protectors
Search for qRT-PCR Assays for microRNAs that regulate MGC57346
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
    
Browse OriGene RNAi
Predesigned siRNA for gene silencing in human, mouse, rat MGC57346

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for MGC57346

Clone
Products:
     
Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for MGC57346
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for MGC57346
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat MGC57346

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for MGC57346
Browse ESI BIO Cell Lines and PureStem Progenitors for MGC57346 
In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MGC57346


(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus
  --

(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
About This Section

TryGeneCards Plus



    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for MGC57346
Interactions:

    Search GeneGlobe Interaction Network for MGC57346

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
About This Section

TryGeneCards Plus
Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for MGC57346



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
About This Section

TryGeneCards Plus

Unigene Cluster for MGC57346:

Uncharacterized LOC401884
Hs.654930  [show with all ESTs]
Unigene Representative Sequence: BC045575
miRNA
Products:
     
Block miRNA regulation of human, mouse, rat MGC57346 using miScript Target Protectors
Search for qRT-PCR Assays for microRNAs that regulate MGC57346
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
     
Browse OriGene RNAi
Predesigned siRNA for gene silencing in human, mouse, rat MGC57346
Clone
Products:
     
Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for MGC57346
DNA2.0 Custom Codon Optimized Gene Synthesis Service for MGC57346
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat MGC57346
Primer
Products:
    
Browse OriGene qPCR
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat MGC57346
  QuantiTect SYBR Green Assays in human, mouse, rat MGC57346
  QuantiFast Probe-based Assays in human, mouse, rat MGC57346

Additional mRNA sequence: 

AK055316.2 AK311451.1 BC012843.1 BC045575.1 NR_026680.2 NR_027295.1 

12 DOTS entries:

DT.40121001  DT.95096024  DT.404766  DT.120895583  DT.100742722  DT.91766601  DT.95123882  DT.101972724 
DT.102822334  DT.120895428  DT.120895613  DT.95368431 

Selected AceView cDNA sequences (see all 101):

AL560337 CB138626 AA382409 AW408318 CB137196 BG912709 D81050 AA383174 
CB137846 BC012843 BC045575 AA776280 BX445889 BQ712011 AX746560 BQ649363 
CK001535 AI034207 BX352447 BF311196 BG056967 BX283815 BU149201 AI299973 

GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

TryGeneCards Plus

Expression evidence for MGC57346:none

MGC57346 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: AACCACTTGG
MGC57346 Expression
About this image

MGC57346 Protein expression data from MOPED1, PaxDb2 and MaxQB3 --

SOURCE GeneReport for Unigene cluster: Hs.654930
    Custom PCR Arrays for MGC57346
Primer
Products:
Browse OriGene qPCR
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat MGC57346
QuantiTect SYBR Green Assays in human, mouse, rat MGC57346
QuantiFast Probe-based Assays in human, mouse, rat MGC57346
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MGC57346

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

TryGeneCards Plus
  --

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section

TryGeneCards Plus
  --

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
About This Section

TryGeneCards Plus
Structural Variations
     Database of Genomic Variants (DGV) 9 variations for MGC57346:    About this table    
Variant IDTypeSubtypePubMed ID
nsv2066CNV Insertion18451855
nsv833458CNV Gain17160897
nsv9563CNV Gain+Loss18304495
esv26189CNV Gain+Loss19812545
esv627CNV CNV17122850
dgv968e1CNV Complex17122850
dgv971e1CNV Complex17122850
dgv967e1CNV Complex17122850
dgv964e1CNV Complex17122850

Site Specific Mutation Identification with PCR Assays
Search QIAGEN SeqTarget long-range PCR primers for resequencing MGC57346
DNA2.0 Custom Variant and Variant Library Synthesis for MGC57346

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

TryGeneCards Plus

Find genes that share disorders with MGC57346           About GenesLikeMe

Genetic Association Database (GAD): MGC57346

Export disorders for MGC57346 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

TryGeneCards Plus

PubMed articles for MGC57346 gene integrated from 10 sources:
(articles sorted by number of sources associating them with MGC57346)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies. (PubMed id 21292315)1, 4  ....Wood N.W. (Lancet 2011)
  2. The transcriptome of human CD34+ hematopoietic stem-progenitor cells. (PubMed id 19416867)1 Kim Y.C....Wang S.M. (Proc. Natl. Acad. Sci. U.S.A. 2009)
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (Nat. Genet. 2004)
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

TryGeneCards Plus
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

TryGeneCards Plus
Entrez Gene: 401884 AceView: FLJ25168 euGenes: HUgn401884

(According to HUGE)
About This Section

TryGeneCards Plus
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
About This Section

TryGeneCards Plus
  --

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section

TryGeneCards Plus
Patent Information for MGC57346 gene:
Search GeneIP for patents involving MGC57346

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, eBioscience, antibodies-online, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from genOway)
About This Section

TryGeneCards Plus

 
 EMD Millipore genomic analysis products

  
 Browse Antibodies   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
 Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
 Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
 Browse OriGene Antibodies   Browse OriGene RNAi products  
 Browse OriGene qPCR primer pairs and template standards   Browse OriGene Protein Over-expression Lysates  
 OriGene Custom Mass Spec   Browse OriGene clones  
 Browse OriGene qSTAR qPCR primer pairs   Browse OriGene full length recombinant human proteins expressed in human HEK293 cells  
 Browse OriGene ORF clones   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for MGC57346   OriGene Custom Protein Services for MGC57346  

 
 
 Block miRNA regulation of human, mouse, rat MGC57346 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing MGC57346
 DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MGC57346 Predesigned siRNA for gene silencing in human, mouse, rat MGC57346
 QuantiFast Probe-based Assays in human, mouse, rat MGC57346 QuantiTect SYBR Green Assays in human, mouse, rat MGC57346
 Custom PCR Arrays for MGC57346 Search Chromatin IP Primers for MGC57346
 Pre-validated RT2 qPCR Primer Assay in human, mouse / rat MGC57346  Search GeneGlobe Interaction Network for MGC57346
 Regulatory tfbs in MGC57346 promoter
 GenScript Custom Purified and Recombinant Proteins Services for MGC57346 GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for MGC57346
 GenScript Custom Assay Services for MGC57346 GenScript Custom overexpressing Cell Line Services for MGC57346
 CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
 Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
 Plasmid Preparation Custom Peptide Services
 Search for Antibodies & Assays

 Search Tocris compounds for MGC57346
 Browse Sino Biological Proteins
 Browse Sino Biological Cell Lysates
 Browse Sino Biological cDNA Clones
 4000+ Proteins
 Search Sino Biological for antibodies, proteins & pathways
 Protein Production Services
 Transfection Reagents
 Protein A/G/L resins
 Isotyping reagents
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

 Novus Biologicals
 Novus Tissue Slides
 Search for Antibodies for MGC57346 at Abcam
 See all of Abcam's Antibodies, Kits and Proteins for MGC57346
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins
 Browse Proteins at Cloud-Clone Corp.
 Browse Antibodies at Cloud-Clone Corp.
 Browse ELISAs at Cloud-Clone Corp.
 Browse CLIAs at Cloud-Clone Corp.



 Browse ESI BIO Cell Lines and PureStem Progenitors for MGC57346
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MGC57346
 Browse SwitchGear 3'UTR luciferase reporter plasmids for MGC57346
 Browse SwitchGear Promoter luciferase reporter plasmids for MGC57346
 Search ThermoFisher Antibodies for MGC57346
 Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat MGC57346
 Browse compounds at ApexBio
 Search Addgene for plasmids for MGC57346
  Search eBioscience for proteins for MGC57346
  Search eBioscience for elisas for MGC57346
  eBioscience FlowRNA Probe Sets
 genOway: Develop your customized and physiologically relevant rodent model for MGC57346
  Search antibodies-online for antibodies for MGC57346
  Search antibodies-online for kits for MGC57346
  Search antibodies-online for peptides for MGC57346
  Search antibodies-online for proteins for MGC57346
       
GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014 , 21 Aug 2014 , 8 Sep 2014 , 7 Oct 2014

View Random Gene

Category
(GIFtS: )
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      MGC57346 gene at Home site.
Version: 3.12.252 27 Nov 2014
hostname: 356980-web2.xennexinc.com index build: 128 solr: 1.4