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Aliases for MGC45922 Gene

Subcategory (RNA class) for MGC45922 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC45922 Gene

  • Uncharacterized LOC284365 3 5
  • CTD-2568A17.5 3

External Ids for MGC45922 Gene

Previous GeneCards Identifiers for MGC45922 Gene

  • GC19P051682
  • GC19P056012
  • GC19U900460
  • GC19P051322

Summaries for MGC45922 Gene

GeneCards Summary for MGC45922 Gene

MGC45922 (Uncharacterized LOC284365) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC45922 Gene

Genomics for MGC45922 Gene

Regulatory Elements for MGC45922 Gene

Genomic Location for MGC45922 Gene

Chromosome:
19
Start:
50,808,874 bp from pter
End:
50,818,880 bp from pter
Size:
10,007 bases
Orientation:
Plus strand

Genomic View for MGC45922 Gene

Genes around MGC45922 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC45922 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC45922 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC45922 Gene

Proteins for MGC45922 Gene

Post-translational modifications for MGC45922 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC45922 Gene

Domains & Families for MGC45922 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC45922 Gene

Function for MGC45922 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC45922 Gene

Localization for MGC45922 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC45922 Gene

Pathways & Interactions for MGC45922 Gene

SuperPathways for MGC45922 Gene

No Data Available

Interacting Proteins for MGC45922 Gene

Gene Ontology (GO) - Biological Process for MGC45922 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC45922 Gene

Drugs & Compounds for MGC45922 Gene

No Compound Related Data Available

Transcripts for MGC45922 Gene

mRNA/cDNA for MGC45922 Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC45922 Gene

Uncharacterized LOC284365:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC45922 Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b · 3c
SP1:
SP2: -

Relevant External Links for MGC45922 Gene

GeneLoc Exon Structure for
MGC45922

Expression for MGC45922 Gene

mRNA expression in normal human tissues for MGC45922 Gene

mRNA differential expression in normal tissues according to GTEx for MGC45922 Gene

This gene is overexpressed in Testis (x13.0).

SOURCE GeneReport for Unigene cluster for MGC45922 Gene Hs.161397

genes like me logo Genes that share expression patterns with MGC45922: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MGC45922 Gene

Orthologs for MGC45922 Gene

Evolution for MGC45922 Gene

ENSEMBL:
Gene Tree for MGC45922 (if available)
TreeFam:
Gene Tree for MGC45922 (if available)

No data available for Orthologs for MGC45922 Gene

Paralogs for MGC45922 Gene

No data available for Paralogs for MGC45922 Gene

Variants for MGC45922 Gene

Sequence variations from dbSNP and Humsavar for MGC45922 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs266117 -- 50,816,261(+) AGGTA(A/T)ACCTC upstream-variant-2KB
rs266118 -- 50,816,702(+) TGGCT(C/G)ACGCT upstream-variant-2KB
rs2411334 -- 50,818,557(-) GGAGG(C/T)ACTGT nc-transcript-variant
rs2739454 -- 50,817,324(+) CTTTG(A/G)AGGGT upstream-variant-2KB
rs2560936 -- 50,816,943(+) AGAGC(A/G)AGACT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MGC45922 Gene

Variant ID Type Subtype PubMed ID
dgv3977n71 CNV Loss 21882294
dgv203n21 CNV Loss 19592680
nsv516450 CNV Loss 19592680
dgv204n21 CNV Loss 19592680

Relevant External Links for MGC45922 Gene

HapMap Linkage Disequilibrium report
MGC45922

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MGC45922 Gene

Disorders for MGC45922 Gene

No disorders were found for MGC45922 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MGC45922 Gene

Publications for MGC45922 Gene

  1. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. (PMID: 15782160) Kim J. … Iyer V.R. (Nat. Methods 2005) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MGC45922 Gene

Sources for MGC45922 Gene

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