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MGC32805 Gene(RNA Gene)

Uncharacterized LOC153163

GCID:
GC05M122436
GIFtS:
16
Genes Participants
UDN Logo

Aliases for MGC32805 Gene

Subcategory (RNA class) for MGC32805 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC32805 Gene

  • Uncharacterized LOC153163 3 5
  • CTC-210G5.1 3

External Ids for MGC32805 Gene

Previous GeneCards Identifiers for MGC32805 Gene

  • GC05M121402
  • GC05M122099
  • GC05M121803
  • GC05U900408
  • GC05M121773

Summaries for MGC32805 Gene

GeneCards Summary for MGC32805 Gene

MGC32805 (Uncharacterized LOC153163) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC32805 Gene

Genomics for MGC32805 Gene

Products:

  1. Regulatory Element

Regulatory Elements for MGC32805 Gene

Enhancers for MGC32805 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G122429 0.7 ENCODE 19.9 +49.0 48968 1.2 NFIB FEZF1 ZNF843 ZNF664 NFIC ZNF544 GLIS1 ZNF350 POU5F1 WT1 MGC32805 GC05P122385
GH05G122484 0.4 ENCODE 21.6 -6.8 -6787 2.6 HNF4A MGC32805 SNCAIP GC05M122494
GH05G122468 0.4 ENCODE 7.2 +9.5 9541 1.5 ZNF146 NFYB MGC32805 GC05P122385
GH05G122479 0.9 ENCODE 0.7 -0.1 -134 0.2 FEZF1 ZNF2 YY1 ZNF302 FOS YY2 ZHX2 TSHZ1 MBD2 MAFF MGC32805 GC05M122494
GH05G122415 0.6 ENCODE 0.2 +63.4 63407 0.2 CTCF ZNF654 TRIM22 RAD21 SMARCA4 SMC3 ZNF524 ZNF143 ENSG00000249916 GC05P122385 MGC32805
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MGC32805 on UCSC Golden Path with GeneCards custom track

Genomic Location for MGC32805 Gene

Chromosome:
5
Start:
122,436,497 bp from pter
End:
122,479,087 bp from pter
Size:
42,591 bases
Orientation:
Minus strand

Genomic View for MGC32805 Gene

Genes around MGC32805 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC32805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC32805 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MGC32805 Gene

Proteins for MGC32805 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MGC32805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC32805 Gene

Domains & Families for MGC32805 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC32805 Gene

Function for MGC32805 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC32805 Gene

Localization for MGC32805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC32805 Gene

Pathways & Interactions for MGC32805 Gene

SuperPathways for MGC32805 Gene

PathCards logo More details on SuperPathways for MGC32805
No Data Available

Interacting Proteins for MGC32805 Gene

Gene Ontology (GO) - Biological Process for MGC32805 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC32805 Gene

Drugs & Compounds for MGC32805 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MGC32805 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MGC32805 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC32805 Gene

Uncharacterized LOC153163:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MGC32805 Gene

No ASD Table

Relevant External Links for MGC32805 Gene

GeneLoc Exon Structure for
MGC32805

Expression for MGC32805 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MGC32805 Gene

mRNA expression in normal human tissues for MGC32805 Gene
mRNA expression by GTEx for MGC32805 Gene

mRNA differential expression in normal tissues according to GTEx for MGC32805 Gene

This gene is overexpressed in Liver (x11.1) and Prostate (x6.3).

SOURCE GeneReport for Unigene cluster for MGC32805 Gene:

Hs.679757
genes like me logo Genes that share expression patterns with MGC32805: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MGC32805 Gene

Orthologs for MGC32805 Gene

Evolution for MGC32805 Gene

ENSEMBL:
Gene Tree for MGC32805 (if available)
TreeFam:
Gene Tree for MGC32805 (if available)

No data available for Orthologs for MGC32805 Gene

Paralogs for MGC32805 Gene

No data available for Paralogs for MGC32805 Gene

Variants for MGC32805 Gene

Sequence variations from dbSNP and Humsavar for MGC32805 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs11326 Likely benign 122,463,810(-) AAAAC(A/G)TACAT intron-variant, nc-transcript-variant, utr-variant-3-prime
rs139256839 Likely benign 122,450,978(+) AGAGT(A/G)TGGAC intron-variant, nc-transcript-variant, reference, missense
rs140850272 Likely benign 122,451,264(+) CAAGC(A/G/T)TAGGA intron-variant, nc-transcript-variant, reference, missense
rs149180835 Likely benign 122,463,566(+) GAACT(C/G)TTCTT intron-variant, nc-transcript-variant, reference, synonymous-codon, utr-variant-3-prime
rs55712196 Likely benign 122,450,972(+) GCGTA(C/G)AGAGT intron-variant, nc-transcript-variant, reference, missense

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MGC32805 Gene

Disorders for MGC32805 Gene

Relevant External Links for MGC32805

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MGC32805

No disorders were found for MGC32805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC32805 Gene

Publications for MGC32805 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MGC32805 Gene

Sources for MGC32805 Gene

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