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MGC32805 Gene(RNA Gene)

Uncharacterized LOC153163

GCID:
GC05M122436
GIFtS:
10
Genes Participants
UDN Logo

Aliases for MGC32805 Gene

Subcategory (RNA class) for MGC32805 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC32805 Gene

  • Uncharacterized LOC153163 3 5
  • CTC-210G5.1 3

External Ids for MGC32805 Gene

Previous GeneCards Identifiers for MGC32805 Gene

  • GC05M121402
  • GC05M122099
  • GC05M121803
  • GC05U900408
  • GC05M121773

Summaries for MGC32805 Gene

GeneCards Summary for MGC32805 Gene

MGC32805 (Uncharacterized LOC153163) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for MGC32805 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC32805 Gene

Genomics for MGC32805 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for MGC32805 Gene

Promoters and enhancers for MGC32805 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05I122479 Enhancer 0.9 ENCODE 550.8 -0.1 -134 0.2 FOXA2 NEUROD1 FEZF1 ZNF2 YY1 ZNF302 FOS RXRA YY2 TSHZ1 MGC32805 ENSG00000260686 GC05M122494
GH05I122429 Enhancer 0.6 ENCODE 19.9 +49.0 48968 1.2 NFIB FEZF1 ZNF843 ZNF664 NFIC ZNF544 GLIS1 POU5F1 ZNF350 WT1 MGC32805 CEP120 GC05P122385 SNCAIP
GH05I122484 Enhancer 0.4 ENCODE 21.6 -6.8 -6786 2.6 RXRA HNF4A MGC32805 SNCAIP GC05M122494
GH05I122468 Enhancer 0.4 ENCODE 7.2 +9.5 9540 1.5 CTCF USF1 NFYB MGC32805 GC05P122385
GH05I122415 Enhancer 0.6 ENCODE 0.2 +63.4 63406 0.2 CTCF ZNF654 TRIM22 RAD21 ZNF592 ZNF335 ZNF524 SMC3 ZNF143 BCLAF1 ENSG00000249916 GC05P122385 MGC32805 SNCAIP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MGC32805 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MGC32805 Gene

Genomic Locations for MGC32805 Gene
chr5:122,436,497-122,479,087
(GRCh38/hg38)
Size:
42,591 bases
Orientation:
Minus strand
chr5:121,772,192-121,814,782
(GRCh37/hg19)

Genomic View for MGC32805 Gene

Genes around MGC32805 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC32805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC32805 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MGC32805 Gene

Proteins for MGC32805 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MGC32805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC32805 Gene

Domains & Families for MGC32805 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC32805 Gene

Function for MGC32805 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for MGC32805 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC32805 Gene

Localization for MGC32805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MGC32805 Gene

Pathways & Interactions for MGC32805 Gene

SuperPathways for MGC32805 Gene

PathCards logo More details on SuperPathways for MGC32805
No Data Available

Interacting Proteins for MGC32805 Gene

Gene Ontology (GO) - Biological Process for MGC32805 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC32805 Gene

Drugs & Compounds for MGC32805 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MGC32805 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MGC32805 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC32805 Gene

Uncharacterized LOC153163:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC32805 Gene

No ASD Table

Relevant External Links for MGC32805 Gene

GeneLoc Exon Structure for
MGC32805

Expression for MGC32805 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MGC32805 Gene

mRNA expression in normal human tissues for MGC32805 Gene
mRNA expression by GTEx for MGC32805 Gene

mRNA differential expression in normal tissues according to GTEx for MGC32805 Gene

This gene is overexpressed in Liver (x11.1) and Prostate (x6.3).

SOURCE GeneReport for Unigene cluster for MGC32805 Gene:

Hs.679757
genes like me logo Genes that share expression patterns with MGC32805: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MGC32805 Gene

Orthologs for MGC32805 Gene

Evolution for MGC32805 Gene

ENSEMBL:
Gene Tree for MGC32805 (if available)
TreeFam:
Gene Tree for MGC32805 (if available)

No data available for Orthologs for MGC32805 Gene

Paralogs for MGC32805 Gene

No data available for Paralogs for MGC32805 Gene

Variants for MGC32805 Gene

Sequence variations from dbSNP and Humsavar for MGC32805 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs113042472 uncertain-significance, Parkinson Disease, Dominant/Recessive 122,444,650(-) C/T intron_variant
rs11326 likely-benign, Parkinson Disease, Dominant/Recessive 122,463,810(-) T/C intron_variant
rs139256839 likely-benign, Parkinson Disease, Dominant/Recessive 122,450,978(-) A/G intron_variant
rs140850272 likely-benign, Parkinson Disease, Dominant/Recessive 122,451,264(-) G/A/T intron_variant
rs143468222 uncertain-significance, Parkinson Disease, Dominant/Recessive 122,450,987(-) G/A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for MGC32805 Gene

Disorders for MGC32805 Gene

Additional Disease Information for MGC32805

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MGC32805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC32805 Gene

Publications for MGC32805 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MGC32805 Gene

Sources for MGC32805 Gene

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