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Aliases for MGC2889 Gene

Subcategory (RNA class) for MGC2889 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for MGC2889 Gene

  • Uncharacterized Protein MGC2889 3

External Ids for MGC2889 Gene

Previous GeneCards Identifiers for MGC2889 Gene

  • GC03U990220
  • GC03P192959

Summaries for MGC2889 Gene

GeneCards Summary for MGC2889 Gene

MGC2889 (Uncharacterized Protein MGC2889) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC2889 Gene

Genomics for MGC2889 Gene

Regulatory Elements for MGC2889 Gene

Enhancers for MGC2889 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F193240 0.4 ENCODE 0.8 -0.5 -503 2.1 INSM2 ZNF76 GLI4 ZNF335 SCRT2 ZNF391 EGR2 ZNF263 ZNF280D YY2 VEZF1P1 ATP13A5-AS1 HRASLS MGC2889
GH03F193301 0.5 ENCODE 0.2 +59.9 59868 0.2 JUN FOS ZNF264 OPA1-AS1 ATP13A5-AS1 MGC2889
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MGC2889 on UCSC Golden Path with GeneCards custom track

Genomic Location for MGC2889 Gene

Chromosome:
3
Start:
193,241,779 bp from pter
End:
193,243,972 bp from pter
Size:
2,194 bases
Orientation:
Plus strand

Genomic View for MGC2889 Gene

Genes around MGC2889 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC2889 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC2889 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC2889 Gene

Proteins for MGC2889 Gene

Post-translational modifications for MGC2889 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC2889 Gene

Domains & Families for MGC2889 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC2889 Gene

Function for MGC2889 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC2889 Gene

Localization for MGC2889 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC2889 Gene

Pathways & Interactions for MGC2889 Gene

SuperPathways for MGC2889 Gene

No Data Available

Interacting Proteins for MGC2889 Gene

Gene Ontology (GO) - Biological Process for MGC2889 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC2889 Gene

Transcripts for MGC2889 Gene

mRNA/cDNA for MGC2889 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :

Unigene Clusters for MGC2889 Gene

Uncharacterized protein MGC2889:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC2889 Gene

No ASD Table

Relevant External Links for MGC2889 Gene

GeneLoc Exon Structure for
MGC2889

Expression for MGC2889 Gene

mRNA expression in normal human tissues for MGC2889 Gene

SOURCE GeneReport for Unigene cluster for MGC2889 Gene:

Hs.676481
genes like me logo Genes that share expression patterns with MGC2889: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MGC2889 Gene

Orthologs for MGC2889 Gene

No data available for Orthologs and Evolution for MGC2889 Gene

Paralogs for MGC2889 Gene

No data available for Paralogs for MGC2889 Gene

Variants for MGC2889 Gene

Sequence variations from dbSNP and Humsavar for MGC2889 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs111829396 -- 193,244,364(+) GAGTG(A/G)TCCAG intron-variant
rs112144199 -- 193,242,044(+) GTGCG(A/G)CCCAG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs112160592 -- 193,243,163(+) AAACT(A/G)TTCAT intron-variant, nc-transcript-variant
rs112278569 -- 193,242,146(+) CAGCT(A/G)TCATT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs112410369 -- 193,240,269(+) GCATA(A/T)TTAGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MGC2889 Gene

Variant ID Type Subtype PubMed ID
esv2759211 CNV gain 17122850
esv3377368 CNV insertion 20981092
nsv1003505 CNV gain 25217958
nsv428429 CNV gain 18775914

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MGC2889 Gene

Disorders for MGC2889 Gene

Relevant External Links for MGC2889

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MGC2889

No disorders were found for MGC2889 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC2889 Gene

Publications for MGC2889 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MGC2889 Gene

Sources for MGC2889 Gene

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