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Aliases for MGC27382 Gene

Subcategory (RNA class) for MGC27382 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for MGC27382 Gene

  • Uncharacterized MGC27382 3

External Ids for MGC27382 Gene

ORGUL Members for MGC27382 Gene

Summaries for MGC27382 Gene

GeneCards Summary for MGC27382 Gene

MGC27382 (Uncharacterized MGC27382) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC27382 Gene

Genomics for MGC27382 Gene

Genomic Location for MGC27382 Gene

Start:
78,229,599 bp from pter
End:
78,369,464 bp from pter
Size:
139,866 bases
Orientation:
Plus strand

Genomic View for MGC27382 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MGC27382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC27382 Gene

Regulatory Elements for MGC27382 Gene

Proteins for MGC27382 Gene

Post-translational modifications for MGC27382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC27382 Gene

Domains for MGC27382 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for MGC27382 Gene

Function for MGC27382 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MGC27382 Gene

Localization for MGC27382 Gene

No data available for Gene Ontology (GO) - Cellular Components for MGC27382 Gene

Pathways for MGC27382 Gene

SuperPathways for MGC27382 Gene

No Data Available

Interacting Proteins for MGC27382 Gene

Gene Ontology (GO) - Biological Process for MGC27382 Gene

None

No data available for Pathways by source for MGC27382 Gene

Transcripts for MGC27382 Gene

mRNA/cDNA for MGC27382 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC27382 Gene

Uncharacterized MGC27382:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC27382 Gene

No ASD Table

Relevant External Links for MGC27382 Gene

GeneLoc Exon Structure for
MGC27382

Expression for MGC27382 Gene

mRNA expression in normal human tissues for MGC27382 Gene

mRNA differential expression in normal tissues according to GTEx for MGC27382 Gene

This gene is overexpressed in Lung (11.9) and Liver (11.0).

SOURCE GeneReport for Unigene cluster for MGC27382 Gene Hs.352665

genes like me logo Genes that share expressions with MGC27382: view

Orthologs for MGC27382 Gene

Evolution for MGC27382 Gene

ENSEMBL:
Gene Tree for MGC27382 (if available)
TreeFam:
Gene Tree for MGC27382 (if available)

No data available for Orthologs for MGC27382 Gene

Paralogs for MGC27382 Gene

No data available for Paralogs for MGC27382 Gene

Variants for MGC27382 Gene

Sequence variations from dbSNP and Humsavar for MGC27382 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs585237 -- 78,249,520(-) CTAAC(C/T)GGCAT intron-variant
rs585252 -- 78,249,511(-) ATTAA(G/T)GTACA intron-variant
rs585677 -- 78,251,170(-) GCAAC(A/G)TGAAT intron-variant
rs589683 -- 78,234,526(+) ATTAG(A/G)CTCAG intron-variant
rs591206 -- 78,235,843(-) ACTAC(C/T)CATTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MGC27382 Gene

Variant ID Type Subtype PubMed ID
nsv871835 CNV Gain 21882294
esv2661951 CNV Deletion 23128226
nsv1555 CNV Insertion 18451855
esv2675789 CNV Deletion 23128226
esv23037 CNV Loss 19812545

Relevant External Links for MGC27382 Gene

HapMap Linkage Disequilibrium report
MGC27382

Disorders for MGC27382 Gene

Relevant External Links for MGC27382

Genetic Association Database (GAD)
MGC27382
genes like me logo Genes that share disorders with MGC27382: view

No data available for UniProtKB/Swiss-Prot for MGC27382 Gene

Publications for MGC27382 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. (PMID: 24376456) Simino J. … Rao D.C. (Front Genet 2013) 3
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 49
  5. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 49

Products for MGC27382 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MGC27382
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MGC27382
    • Block miRNA regulation of MGC27382 using miScript Target Protectors

    Sources for MGC27382 Gene

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