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Aliases for MGC27382 Gene

Subcategory (RNA class) for MGC27382 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC27382 Gene

  • Uncharacterized MGC27382 3 5

External Ids for MGC27382 Gene

Previous GeneCards Identifiers for MGC27382 Gene

  • GC01P078855
  • GC01P077594
  • GC01P078087
  • GC01U900421
  • GC01P078407
  • GC01P078696

Summaries for MGC27382 Gene

GeneCards Summary for MGC27382 Gene

MGC27382 (Uncharacterized MGC27382) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC27382 Gene

Genomics for MGC27382 Gene

Regulatory Elements for MGC27382 Gene


Genomic Location for MGC27382 Gene

Chromosome:
1
Start:
78,229,599 bp from pter
End:
78,369,464 bp from pter
Size:
139,866 bases
Orientation:
Plus strand

Genomic View for MGC27382 Gene

Genes around MGC27382 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC27382 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC27382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC27382 Gene

Proteins for MGC27382 Gene

Post-translational modifications for MGC27382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC27382 Gene

Domains & Families for MGC27382 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC27382 Gene

Function for MGC27382 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC27382 Gene

Localization for MGC27382 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC27382 Gene

Pathways & Interactions for MGC27382 Gene

SuperPathways for MGC27382 Gene

No Data Available

Interacting Proteins for MGC27382 Gene

Gene Ontology (GO) - Biological Process for MGC27382 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC27382 Gene

Transcripts for MGC27382 Gene

mRNA/cDNA for MGC27382 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC27382 Gene

Uncharacterized MGC27382:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC27382 Gene

No ASD Table

Relevant External Links for MGC27382 Gene

GeneLoc Exon Structure for
MGC27382

Expression for MGC27382 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MGC27382 Gene

mRNA differential expression in normal tissues according to GTEx for MGC27382 Gene

This gene is overexpressed in Lung (x11.9) and Liver (x11.0).

SOURCE GeneReport for Unigene cluster for MGC27382 Gene:

Hs.352665
genes like me logo Genes that share expression patterns with MGC27382: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MGC27382 Gene

Orthologs for MGC27382 Gene

Evolution for MGC27382 Gene

ENSEMBL:
Gene Tree for MGC27382 (if available)
TreeFam:
Gene Tree for MGC27382 (if available)

No data available for Orthologs for MGC27382 Gene

Paralogs for MGC27382 Gene

No data available for Paralogs for MGC27382 Gene

Variants for MGC27382 Gene

Sequence variations from dbSNP and Humsavar for MGC27382 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1004435 -- 78,275,719(-) AATAA(A/C)CTGAG intron-variant
rs10489948 -- 78,281,856(+) AAACT(C/T)GGAAA intron-variant
rs10489949 -- 78,340,281(+) TGCCT(G/T)ACTTT intron-variant
rs10493608 -- 78,229,569(+) TTGGA(A/T)TAGTT upstream-variant-2KB
rs10598533 -- 78,278,571(+) ACACA(-/CA)AAACA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MGC27382 Gene

Variant ID Type Subtype PubMed ID
esv23037 CNV loss 19812545
esv2661951 CNV deletion 23128226
esv2675789 CNV deletion 23128226
esv2762158 CNV loss 21179565
esv2763564 CNV loss 21179565
esv2763565 CNV loss 21179565
esv3577975 CNV loss 25503493
esv3581915 CNV gain 25503493
esv3586541 CNV loss 21293372
nsv1011898 CNV loss 25217958
nsv1113138 CNV deletion 24896259
nsv1555 CNV insertion 18451855
nsv946008 CNV duplication 23825009
nsv946009 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MGC27382 Gene

Disorders for MGC27382 Gene

Relevant External Links for MGC27382

Genetic Association Database (GAD)
MGC27382
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MGC27382

No disorders were found for MGC27382 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC27382 Gene

Publications for MGC27382 Gene

  1. Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. (PMID: 24376456) Simino J. … Rao D.C. (Front Genet 2013) 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64
  4. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D. … Mitchell G.F. (BMC Med. Genet. 2007) 46 64
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for MGC27382 Gene

Sources for MGC27382 Gene

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