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Aliases for MGC27382 Gene

Subcategory (RNA class) for MGC27382 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC27382 Gene

  • Uncharacterized MGC27382 3 5

External Ids for MGC27382 Gene

Previous GeneCards Identifiers for MGC27382 Gene

  • GC01P078855
  • GC01P077594
  • GC01P078087
  • GC01U900421
  • GC01P078407
  • GC01P078696

Summaries for MGC27382 Gene

GeneCards Summary for MGC27382 Gene

MGC27382 (Uncharacterized MGC27382) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC27382 Gene

Genomics for MGC27382 Gene

Regulatory Elements for MGC27382 Gene

Enhancers for MGC27382 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MGC27382 on UCSC Golden Path with GeneCards custom track

Genomic Location for MGC27382 Gene

Chromosome:
1
Start:
78,229,599 bp from pter
End:
78,369,464 bp from pter
Size:
139,866 bases
Orientation:
Plus strand

Genomic View for MGC27382 Gene

Genes around MGC27382 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC27382 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC27382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC27382 Gene

Proteins for MGC27382 Gene

Post-translational modifications for MGC27382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC27382 Gene

Domains & Families for MGC27382 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC27382 Gene

Function for MGC27382 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC27382 Gene

Localization for MGC27382 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC27382 Gene

Pathways & Interactions for MGC27382 Gene

SuperPathways for MGC27382 Gene

No Data Available

Interacting Proteins for MGC27382 Gene

Gene Ontology (GO) - Biological Process for MGC27382 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC27382 Gene

Drugs & Compounds for MGC27382 Gene

No Compound Related Data Available

Transcripts for MGC27382 Gene

mRNA/cDNA for MGC27382 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC27382 Gene

Uncharacterized MGC27382:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC27382 Gene

No ASD Table

Relevant External Links for MGC27382 Gene

GeneLoc Exon Structure for
MGC27382

Expression for MGC27382 Gene

mRNA expression in normal human tissues for MGC27382 Gene

mRNA differential expression in normal tissues according to GTEx for MGC27382 Gene

This gene is overexpressed in Lung (x11.9) and Liver (x11.0).

SOURCE GeneReport for Unigene cluster for MGC27382 Gene Hs.352665

genes like me logo Genes that share expression patterns with MGC27382: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MGC27382 Gene

Orthologs for MGC27382 Gene

Evolution for MGC27382 Gene

ENSEMBL:
Gene Tree for MGC27382 (if available)
TreeFam:
Gene Tree for MGC27382 (if available)

No data available for Orthologs for MGC27382 Gene

Paralogs for MGC27382 Gene

No data available for Paralogs for MGC27382 Gene

Variants for MGC27382 Gene

Sequence variations from dbSNP and Humsavar for MGC27382 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs589683 -- 78,234,526(+) ATTAG(A/G)CTCAG intron-variant
rs591206 -- 78,235,843(-) ACTAC(C/T)CATTC intron-variant
rs600982 -- 78,248,358(-) ggttt(C/T)agcat intron-variant
rs644224 -- 78,248,813(-) ATCTC(A/G)CCCTA intron-variant
rs645920 -- 78,253,131(+) TGGAG(A/G)ATCCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MGC27382 Gene

Variant ID Type Subtype PubMed ID
nsv871835 CNV Gain 21882294
esv2661951 CNV Deletion 23128226
nsv1555 CNV Insertion 18451855
esv2675789 CNV Deletion 23128226
esv23037 CNV Loss 19812545

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MGC27382 Gene

Disorders for MGC27382 Gene

Relevant External Links for MGC27382

Genetic Association Database (GAD)
MGC27382

No disorders were found for MGC27382 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC27382 Gene

Publications for MGC27382 Gene

  1. Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. (PMID: 24376456) Simino J. … Rao D.C. (Front Genet 2013) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MGC27382 Gene

Sources for MGC27382 Gene

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