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Aliases for MGC16275 Gene

Subcategory (RNA class) for MGC16275 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for MGC16275 Gene

  • Uncharacterized Protein MGC16275 3

External Ids for MGC16275 Gene

ORGUL Members for MGC16275 Gene

Previous GeneCards Identifiers for MGC16275 Gene

  • GC17U990262
  • GC17M072206

Summaries for MGC16275 Gene

GeneCards Summary for MGC16275 Gene

MGC16275 (Uncharacterized Protein MGC16275) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC16275 Gene

Genomics for MGC16275 Gene

Regulatory Elements for MGC16275 Gene

Genomic Location for MGC16275 Gene

Start:
74,209,980 bp from pter
End:
74,213,342 bp from pter
Size:
3,363 bases
Orientation:
Minus strand

Genomic View for MGC16275 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MGC16275 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC16275 Gene

Proteins for MGC16275 Gene

Post-translational modifications for MGC16275 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC16275 Gene

Domains for MGC16275 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC16275 Gene

Function for MGC16275 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MGC16275 Gene

Localization for MGC16275 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC16275 Gene

Pathways for MGC16275 Gene

SuperPathways for MGC16275 Gene

No Data Available

Interacting Proteins for MGC16275 Gene

Gene Ontology (GO) - Biological Process for MGC16275 Gene

None

No data available for Pathways by source for MGC16275 Gene

Transcripts for MGC16275 Gene

mRNA/cDNA for MGC16275 Gene

(3) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC16275 Gene

Uncharacterized protein MGC16275:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MGC16275

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MGC16275 Gene

No ASD Table

Relevant External Links for MGC16275 Gene

GeneLoc Exon Structure for
MGC16275

Expression for MGC16275 Gene

mRNA expression in normal human tissues for MGC16275 Gene

SOURCE GeneReport for Unigene cluster for MGC16275 Gene Hs.706954

genes like me logo Genes that share expressions with MGC16275: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MGC16275 Gene

Orthologs for MGC16275 Gene

Evolution for MGC16275 Gene

ENSEMBL:
Gene Tree for MGC16275 (if available)
TreeFam:
Gene Tree for MGC16275 (if available)

No data available for Orthologs for MGC16275 Gene

Paralogs for MGC16275 Gene

No data available for Paralogs for MGC16275 Gene

Variants for MGC16275 Gene

Sequence variations from dbSNP and Humsavar for MGC16275 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs4789637 -- 74,210,654(+) TACCC(A/G)AGGTA nc-transcript-variant
rs8065498 -- 74,210,979(+) AGCAC(A/G)TCGTC nc-transcript-variant
rs56278674 -- 74,210,886(+) CACTG(-/TG)GGCGG nc-transcript-variant
rs62063445 -- 74,210,905(+) CCTTT(C/T)CCGTT nc-transcript-variant
rs73354700 -- 74,210,445(+) CACTC(A/G)CTAAC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MGC16275 Gene

Variant ID Type Subtype PubMed ID
dgv12e196 CNV Duplication 17116639
dgv372n27 CNV Gain 19166990
nsv517569 CNV Gain+Loss 19592680
esv2751770 CNV Gain 17911159
nsv509673 CNV Insertion 20534489
nsv833538 CNV Gain 17160897

Relevant External Links for MGC16275 Gene

HapMap Linkage Disequilibrium report
MGC16275

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MGC16275 Gene

Disorders for MGC16275 Gene

No disorders were found for MGC16275 Gene.

No data available for UniProtKB/Swiss-Prot for MGC16275 Gene

Publications for MGC16275 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MGC16275 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MGC16275
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MGC16275
    • Block miRNA regulation of MGC16275 using miScript Target Protectors

    Sources for MGC16275 Gene

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