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Aliases for MGC16025 Gene

Subcategory (RNA class) for MGC16025 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for MGC16025 Gene

  • Uncharacterized LOC85009 3

External Ids for MGC16025 Gene

ORGUL Members for MGC16025 Gene

Summaries for MGC16025 Gene

GeneCards Summary for MGC16025 Gene

MGC16025 (Uncharacterized LOC85009) is an RNA Gene, and belongs to the lncRNA class. Among its related pathways are GPCR Pathway and CREB Pathway.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC16025 Gene

Genomics for MGC16025 Gene

Genomic Location for MGC16025 Gene

Start:
239,193,331 bp from pter
End:
239,195,457 bp from pter
Size:
2,127 bases
Orientation:
Minus strand

Genomic View for MGC16025 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MGC16025 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC16025 Gene

Regulatory Elements for MGC16025 Gene

Proteins for MGC16025 Gene

  • Protein details for MGC16025 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q53SB4-Q53SB4
    Recommended name:
    Putative uncharacterized protein MGC16025
    Protein Accession:
    Q53SB4
    Secondary Accessions:

    Protein attributes for MGC16025 Gene

    Size:
    31 amino acids
    Molecular mass:
    3359 Da
    Quaternary structure:
    No Data Available
  • Protein details for MGC16025 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q53SM2-Q53SM2
    Recommended name:
    Putative uncharacterized protein MGC16025
    Protein Accession:
    Q53SM2
    Secondary Accessions:

    Protein attributes for MGC16025 Gene

    Size:
    1052 amino acids
    Molecular mass:
    115600 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MGC16025 Gene

Proteomics data for MGC16025 Gene at MOPED

Post-translational modifications for MGC16025 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC16025 Gene

Domains for MGC16025 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MGC16025: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC16025 Gene

Function for MGC16025 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MGC16025 Gene

Localization for MGC16025 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC16025 Gene

Pathways for MGC16025 Gene

genes like me logo Genes that share pathways with MGC16025: view

Interacting Proteins for MGC16025 Gene

Gene Ontology (GO) - Biological Process for MGC16025 Gene

None

Transcripts for MGC16025 Gene

mRNA/cDNA for MGC16025 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :

Unigene Clusters for MGC16025 Gene

Uncharacterized LOC85009:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC16025 Gene

No ASD Table

Relevant External Links for MGC16025 Gene

GeneLoc Exon Structure for
MGC16025

Expression for MGC16025 Gene

mRNA expression in normal human tissues for MGC16025 Gene

SOURCE GeneReport for Unigene cluster for MGC16025 Gene Hs.744565

genes like me logo Genes that share expressions with MGC16025: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MGC16025 Gene

Orthologs for MGC16025 Gene

No data available for Orthologs and Evolution for MGC16025 Gene

Paralogs for MGC16025 Gene

Selected SIMAP similar genes for MGC16025 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with MGC16025: view

No data available for Paralogs for MGC16025 Gene

Variants for MGC16025 Gene

Structural Variations from Database of Genomic Variants (DGV) for MGC16025 Gene

Variant ID Type Subtype PubMed ID
nsv876071 CNV Loss 21882294
dgv4462n71 CNV Loss 21882294
nsv834579 CNV Loss 17160897
nsv876081 CNV Loss 21882294
nsv428409 CNV Gain 18775914
dgv4463n71 CNV Loss 21882294
dgv4464n71 CNV Loss 21882294
dgv4465n71 CNV Loss 21882294
nsv876090 CNV Loss 21882294
nsv834582 CNV Loss 17160897

Relevant External Links for MGC16025 Gene

HapMap Linkage Disequilibrium report
MGC16025

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MGC16025 Gene

Disorders for MGC16025 Gene

Relevant External Links for MGC16025

Genetic Association Database (GAD)
MGC16025
genes like me logo Genes that share disorders with MGC16025: view

No data available for UniProtKB/Swiss-Prot for MGC16025 Gene

Publications for MGC16025 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. MELOE-1 is a new antigen overexpressed in melanomas and involved in adoptive T cell transfer efficiency. (PMID: 18936238) Godet Y. … Labarriere N. (J. Exp. Med. 2008) 3
  3. Frequent occurrence of high affinity T cells against MELOE-1 makes this antigen an attractive target for melanoma immunotherapy. (PMID: 20217862) Godet Y. … LabarriA"re N. (Eur. J. Immunol. 2010) 3
  4. Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. (PMID: 23453885) (Lancet 2013) 3
  5. The melanoma antigens MELOE-1 and MELOE-2 are translated from a bona fide polycistronic mRNA containing functional IRES sequences. (PMID: 24086473) Carbonnelle D. … Lang F. (PLoS ONE 2013) 3

Products for MGC16025 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MGC16025
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MGC16025
    • Block miRNA regulation of MGC16025 using miScript Target Protectors

    Sources for MGC16025 Gene

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