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Aliases for MGC15885 Gene

Subcategory (RNA class) for MGC15885 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for MGC15885 Gene

  • Uncharacterized Protein MGC15885 3 5

External Ids for MGC15885 Gene

Previous GeneCards Identifiers for MGC15885 Gene

  • GC15M058715
  • GC15M055977
  • GC15M060508
  • GC15U900145
  • GC15M060645
  • GC15M060717
  • GC15M062929
  • GC15M062742
  • GC15M062777
  • GC15M063095
  • GC15M063283

Summaries for MGC15885 Gene

GeneCards Summary for MGC15885 Gene

MGC15885 (Uncharacterized Protein MGC15885) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC15885 Gene

Genomics for MGC15885 Gene

Regulatory Elements for MGC15885 Gene

Enhancers for MGC15885 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F062647 1.1 Ensembl ENCODE 0.8 -2.5 -2471 1.3 KLF17 RAD21 YY1 RFX5 ZNF366 RCOR1 FOS DEK SMARCC1 CEBPB MGC15885 LOC105370855
GH15F062649 1 Ensembl ENCODE 0.8 -4.7 -4710 1.2 ZNF263 SRF MAFG JUNB SP1 ZFHX2 JUND ZNF316 MAFF EED MGC15885 LOC105370855
GH15F062643 1 Ensembl ENCODE 0.8 +0.4 362 2.6 ELF3 TFAP4 ESRRA SAP130 ZIC2 RAD21 YY1 POLR2A HNF4G MAFK MGC15885 GC15P067902
GH15F062605 1 Ensembl ENCODE 0.3 +38.5 38491 2.4 PKNOX1 JUN SIN3A ZBTB40 BRCA1 RAD21 YY1 RFX5 CTBP1 GATA3 TLN2 MGC15885 GC15P067902
GH15F062603 1.4 FANTOM5 Ensembl ENCODE 0.2 +41.3 41290 1.4 TBP ZFP64 SIN3A BRCA1 RAD21 RFX5 GTF3C2 RCOR1 FOS THAP11 TLN2 VPS13C MGC15885 GC15P067902
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MGC15885 on UCSC Golden Path with GeneCards custom track

Genomic Location for MGC15885 Gene

Chromosome:
15
Start:
62,637,172 bp from pter
End:
62,645,291 bp from pter
Size:
8,120 bases
Orientation:
Minus strand

Genomic View for MGC15885 Gene

Genes around MGC15885 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC15885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC15885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC15885 Gene

Proteins for MGC15885 Gene

Post-translational modifications for MGC15885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC15885 Gene

Domains & Families for MGC15885 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC15885 Gene

Function for MGC15885 Gene

Phenotypes for MGC15885 Gene

GenomeRNAi human phenotypes for MGC15885:
genes like me logo Genes that share phenotypes with MGC15885: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC15885 Gene

Localization for MGC15885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MGC15885 Gene

Pathways & Interactions for MGC15885 Gene

SuperPathways for MGC15885 Gene

No Data Available

Interacting Proteins for MGC15885 Gene

Gene Ontology (GO) - Biological Process for MGC15885 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MGC15885 Gene

Transcripts for MGC15885 Gene

mRNA/cDNA for MGC15885 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC15885 Gene

Uncharacterized protein MGC15885:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC15885 Gene

No ASD Table

Relevant External Links for MGC15885 Gene

GeneLoc Exon Structure for
MGC15885

Expression for MGC15885 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MGC15885 Gene

mRNA differential expression in normal tissues according to GTEx for MGC15885 Gene

This gene is overexpressed in Testis (x8.5) and Vagina (x5.2).

SOURCE GeneReport for Unigene cluster for MGC15885 Gene:

Hs.352253
genes like me logo Genes that share expression patterns with MGC15885: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MGC15885 Gene

Orthologs for MGC15885 Gene

Evolution for MGC15885 Gene

ENSEMBL:
Gene Tree for MGC15885 (if available)
TreeFam:
Gene Tree for MGC15885 (if available)

No data available for Orthologs for MGC15885 Gene

Paralogs for MGC15885 Gene

No data available for Paralogs for MGC15885 Gene

Variants for MGC15885 Gene

Sequence variations from dbSNP and Humsavar for MGC15885 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs10658589 -- 62,642,583(+) GGATG(-/TAGT)GTAAA intron-variant
rs11071678 -- 62,637,007(+) CATCA(C/T)AGTGG intron-variant
rs11071679 -- 62,639,800(+) CCCAG(C/T)GGGTT intron-variant
rs11071680 -- 62,643,292(+) GCTTG(A/G)AAAAA intron-variant
rs111663201 -- 62,646,368(+) ATGTT(A/G)GACAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MGC15885 Gene

Variant ID Type Subtype PubMed ID
nsv1035441 CNV gain 25217958
nsv1044132 CNV gain 25217958
nsv1116079 CNV deletion 24896259

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MGC15885 Gene

Disorders for MGC15885 Gene

Relevant External Links for MGC15885

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MGC15885

No disorders were found for MGC15885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC15885 Gene

Publications for MGC15885 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MGC15885 Gene

Sources for MGC15885 Gene

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