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Aliases for MFSD14C Gene

Aliases for MFSD14C Gene

  • Major Facilitator Superfamily Domain Containing 14C 2 3 5
  • Hippocampus Abundant Transcript-Like 2 2 3
  • HIATL2 3 4
  • Major Facilitator Superfamily Domain-Containing 14C 4
  • Hippocampus Abundant Gene Transcript-Like 2 3

External Ids for MFSD14C Gene

Previous HGNC Symbols for MFSD14C Gene

  • HIATL2

Summaries for MFSD14C Gene

GeneCards Summary for MFSD14C Gene

MFSD14C (Major Facilitator Superfamily Domain Containing 14C) is a Pseudogene. An important paralog of this gene is MFSD14B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MFSD14C Gene

Genomics for MFSD14C Gene

Regulatory Elements for MFSD14C Gene

Promoters for MFSD14C Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MFSD14C on UCSC Golden Path with GeneCards custom track

Genomic Location for MFSD14C Gene

Chromosome:
9
Start:
96,898,066 bp from pter
End:
97,013,580 bp from pter
Size:
115,515 bases
Orientation:
Minus strand

Genomic View for MFSD14C Gene

Genes around MFSD14C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MFSD14C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MFSD14C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MFSD14C Gene

Proteins for MFSD14C Gene

  • Protein details for MFSD14C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VZR4-MF14C_HUMAN
    Recommended name:
    Hippocampus abundant transcript-like protein 2
    Protein Accession:
    Q5VZR4
    Secondary Accessions:
    • Q9BSG7

    Protein attributes for MFSD14C Gene

    Size:
    134 amino acids
    Molecular mass:
    14477 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BC005058; Type=Miscellaneous discrepancy; Note=The sequence differs at the 3 end.; Evidence={ECO:0000305};

neXtProt entry for MFSD14C Gene

Proteomics data for MFSD14C Gene at MOPED

Post-translational modifications for MFSD14C Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MFSD14C Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for MFSD14C Gene

Domains & Families for MFSD14C Gene

Protein Domains for MFSD14C Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MFSD14C Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5VZR4

UniProtKB/Swiss-Prot:

MF14C_HUMAN :
  • Belongs to the major facilitator superfamily.
Family:
  • Belongs to the major facilitator superfamily.
genes like me logo Genes that share domains with MFSD14C: view

No data available for Gene Families for MFSD14C Gene

Function for MFSD14C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MFSD14C Gene

Localization for MFSD14C Gene

Subcellular locations from UniProtKB/Swiss-Prot for MFSD14C Gene

Membrane; Multi-pass membrane protein.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MFSD14C Gene

Pathways & Interactions for MFSD14C Gene

SuperPathways for MFSD14C Gene

No Data Available

Interacting Proteins for MFSD14C Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000364371%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000364371 for MFSD14C Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for MFSD14C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MFSD14C Gene

Drugs & Compounds for MFSD14C Gene

No Compound Related Data Available

Transcripts for MFSD14C Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MFSD14C Gene

No ASD Table

Relevant External Links for MFSD14C Gene

GeneLoc Exon Structure for
MFSD14C
ECgene alternative splicing isoforms for
MFSD14C

Expression for MFSD14C Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MFSD14C Gene

Orthologs for MFSD14C Gene

This gene was present in the common ancestor of animals.

Orthologs for MFSD14C Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia HIATL1 36
  • 23 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 24 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 19 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Hiatl1 36
  • 21 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia HIATL2 36
  • 96 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 19 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii CU856539.1 36
  • 17 (a)
ManyToMany
si:ch211-87m7.2 36
  • 17 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG11537 36
  • 10 (a)
ManyToMany
CG17637 36
  • 9 (a)
ManyToMany
CG18281 36
  • 8 (a)
ManyToMany
CG5078 36
  • 14 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea T25D3.4 36
  • 13 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.6723 36
  • 15 (a)
OneToMany
Species with no ortholog for MFSD14C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for MFSD14C Gene

ENSEMBL:
Gene Tree for MFSD14C (if available)
TreeFam:
Gene Tree for MFSD14C (if available)

Paralogs for MFSD14C Gene

Paralogs for MFSD14C Gene

genes like me logo Genes that share paralogs with MFSD14C: view

Variants for MFSD14C Gene

Variation tolerance for MFSD14C Gene

Gene Damage Index Score: 3.64; 56.77% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MFSD14C Gene

HapMap Linkage Disequilibrium report
MFSD14C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MFSD14C Gene

Disorders for MFSD14C Gene

Relevant External Links for MFSD14C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MFSD14C
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MFSD14C

No disorders were found for MFSD14C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MFSD14C Gene

Publications for MFSD14C Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4 67
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MFSD14C Gene

Sources for MFSD14C Gene

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