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Aliases & Descriptions for MFGE8
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BA46 1 , 2 EDIL1 1 , 2 HMFG 3 HsT19888 1 , 2 MFG-E8 1 , 2 , 3 MFGM 3 OAcGD3S 1 , 2 SED1 1 , 2 SPAG10 2 hP47 1 , 2 lactadherin 2 medin 2
Descriptions Breast epithelial antigen BA46 3 Milk fat globule-EGF factor 8 3 O-acetyl disialoganglioside synthase 2 milk fat globule-EGF factor 8 protein 2 sperm associated antigen 10 1 , 2 sperm surface protein hP47 2
Search outside databases for aliases for MFGE8 genePrevious GC identifers: GC15M085781 GC15M082807 GC15M087029 GC15M087172 GC15M087173
Summaries for MFGE8 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: MFGM_HUMAN, Q08431 Function : Medin is the main constituent of aortic medial amyloid
Gene Wiki entry for MFGE8
Genomic Location for MFGE8
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MFGE8 gene Entrez Gene cytogenetic band: 15q25 Ensembl cytogenetic band: 15q26.1 HGNC cytogenetic band: 15q25 MFGE8 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 15 GeneLoc Exon Structure
GeneLoc location for GC15M087243:
(about GC identifiers )
Start:
87,242,920 bp from pter
End:
87,257,614 bp from pter
Size:
14,695 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000015.8 NT_010274.16 Proteins for MFGE8
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MFGM_HUMAN, Q08431 (See
protein sequence )Recommended Name: Lactadherin precursor Size : 387 amino acids; 43123 Da
Subcellular location : Membrane; Peripheral membrane protein
Secondary accessions : B2R6M7 Q53FU9
Post-translational modifications:
Medin has a ragged N-terminus with minor species starting at Pro-264 and Gly-2731
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001108086.1 NP_005919.2 ENSEMBL proteins: ENSP00000268151 ENSP00000268150 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MFGE8: Assays for MFGE8:
Protein
Domains/ Families for MFGE8(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q08431 ProtoNet protein and cluster: Q08431
3 Blocks protein families : IPB000421 Coagulation factor 5/8 type C domain (FA58C) IPB001438 Type II EGF-like signature IPB006210 Type I EGF UniProtKB/Swiss-Prot: MFGM_HUMAN, Q08431 Similarity : Contains 1 EGF-like domainSimilarity : Contains 2 F5/8 type C domains
Gene Function for MFGE8
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001114614 Applied Biosystems Silencer ® siRNAs for MFGE8 Sigma-Aldrich siRNA for MFGE8 Sigma-Aldrich shRNA Panels and shRNA for MFGE8 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005928 UniProtKB/Swiss-Prot: MFGM_HUMAN, Q08431 Function : Specific ligand for the alpha-v/beta-3 and alpha-v/beta-5 receptors. Also binds tophosphatidylserine-enriched cell surfaces in a receptor-independent manner. Zona pellucida-bindingprotein which may play a role in gamete interaction. Binds specifically to rotavirus and inhibitsits replication Function : Medin is the main constituent of aortic medial amyloid
Genatlas biochemistry entry for MFGE8 :human milk fat globule protein,46kDa,murine mammary protein MFG-E8 homolog,associated to apoptosis
7 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Mfge8) :4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for MFGE8
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for MFGE8 5/8 Interacting proteins for MFGE8 (ENSP00000268150 3 ) via UniProtKB, MINT, and/or STRING (see all 8
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
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Drugs & Compounds for MFGE8 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MFGE8 3 Novoseek chemical compound relationships for MFGE8 gene
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Transcripts for MFGE8(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001114614 Sigma-Aldrich siRNA for MFGE8 Sigma-Aldrich shRNA Panels and shRNA for MFGE8 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001114614 NM_005928
REFSEQ mRNAs for MFGE8 gene (2 alternative transcripts): NM_001114614.1 NM_005928.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001114614 NM_005928
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001114614  
Additional cDNA sequence: AK092157.1 AK095908.1 AK222735.1 AK223182.1 AK304627.1 AK310357.1 AK312640.1 AY141974.1 BC003610.2 BT006948.1 BX537974.1 CR590960.1 CR591207.1 CR592072.1 CR592357.1 CR595108.1 CR603150.1 CR609258.1 CR622104.1 CR624080.1 CR624954.1 S56151.1 U58516.1
24/31 DOTS entries (see all 31
): DT.92453118 DT.95331148 DT.95329332 DT.91870799 DT.100845960 DT.102843217 DT.100845946 DT.95264516 DT.121080280 DT.92453126 DT.100845957 DT.121080273 DT.100845948 DT.121080300 DT.95118753 DT.100038124 DT.100845963 DT.121080306 DT.100038123 DT.121080284 DT.100845955 DT.102843215 DT.121080245 DT.100845954
24/675 AceView cDNA sequences (see all 675
):CB153003 AW276464 AA477212 AI660445 AL524657 BQ446436 F10041 BQ219455 AA026693 BG677052 CR609258 AU151937 BU149720 F01452 BQ026509 CD621387 AW513662 AA292038 BP365294 CR590960 AI244278 H25538 CR622104 BQ436244
highest scoring ESTs for MFGE8 :U58516 AA019189 AA080914 AA115999 AI272315 AK095908 AL519278 AL530483 AL530950 AL531012
Unigene Cluster for MFGE8: Milk fat globule-EGF factor 8 protein Hs.3745 [show with all ESTs ] Unigene Representative Sequence: AK092157 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for MFGE8 (see all 13
) ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b · 8c · 8d ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13a · 13b · 13c · 13d ^ 14a · 14b ^ 15a · SP1 :       -     -   -               -     -   -   -   -   -               SP2 :       -   -   -   -               -     -   -   -   -   -               SP3 :       -   -   -   -               -     -   -   -   -   -         -   -     SP4 :       -   -   -   -               -     -   -   -   -   -   -             SP5 :       -   -   -   -   -             -     -   -   -   -   -              
About this scheme ECgene alternative splicing isoforms for MFGE8 2 Ensembl transcripts including schematic representations : ENST00000268151
ENST00000268150
Expression for MFGE8
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MFGE8 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MFGE8 1 / 2 / 3
5 probe-sets matching MFGE8 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GGTTGGCAGGSOURCE GeneReport for Unigene cluster: Hs.3745 Expression variation in blood from EXPOLDB for MFGE8
UniProtKB/Swiss-Prot: MFGM_HUMAN, Q08431 Tissue specificity : Mammary epithelial cell surfaces and aortic media. Overexpressed in severalcarcinomas
Orthologs for MFGE8
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MFGE8 gene from 4 species
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
chimpanzee (Pan troglodytes)
MFGE81
--
milk fat globule-EGF factor 8 protein
99.57(n) 99.48(a)
453631 XM_001165789.1 XP_001165789.1
mouse (Mus musculus)
Mfge85
7 (41.20 cM)
milk fat globule-EGF factor 8 protein
--
Y11684
zebrafish (Danio rerio)
Dr.289012
--
Transcribed sequence with weak similarity to protein more
73.78(n)
CK398618.1
African clawed frog (Xenopus laevis)
Xl.128622
--
Xenopus laevis transcribed sequence with weak similarity more
69.59(n)
CF549359.1
About this table Species with no ortholog for MFGE8 ENSEMBL Gene Tree for MFGE8 Paralogs for MFGE8 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for MFGE8 gene EDIL3 2 NRP2 2 NRP1 2
SNPs/Variants for MFGE8 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MFGE8 (up to first 250kb)
Disorders & Mutations for MFGE8
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602281 6 Novoseek disease relationships for MFGE8 gene
About this table
Medical News for MFGE8 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for MFGE8 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/115 PubMed articles for MFGE8 gene (see all 115
): Lactadherin (formerly BA46), a membrane-associated glycoprotein expressed in human milk and breast carcinomas, promotes Arg-Gly-Asp (RGD)-dependent cell adhesion. (PubMed id 9260929) 1, 3, 4 Taylor M.R.... Peterson J.A. (1997) Medin: an integral fragment of aortic smooth muscle cell-produced lactadherin forms the most common human amyloid. (PubMed id 10411933) 1, 3, 4 Haeggqvist B.... Westermark P. (1999) Mapping of a newly discovered human gene homologous to the apoptosis associated-murine mammary protein, MFG-E8, to chromosome 15q25. (PubMed id 9027496) 1, 2, 3 Collins C....Parry G. (1997) Cloning and sequence analysis of human breast epithelial antigen BA46 reveals an RGD cell adhesion sequence presented on an epidermal growth factor-like domain. (PubMed id 8639264) 1, 3, 4 Couto J.R.... Peterson J.A. (1996) SED1/MFG-E8: a bi-motif protein that orchestrates diverse cellular interactions. (PubMed id 19204935) 1, 2, 3 Raymond A....Shur B.D. (2009) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 3, 4 Ota T....Sugano S. (2004) Isolation and characterization of full and truncated forms of human breast carcinoma protein BA46 from human milk fat globule membranes. (PubMed id 9535276) 3, 4 Giuffrida M.G....Godovac-Zimmermann J. (1998) A Mr 46,000 human milk fat globule protein that is highly expressed in human breast tumors contains factor VIII-like domains. (PubMed id 1909932) 3, 4 Larocca D....Ceriani R.L. (1991) p63(TP63) elicits strong trans-activation of the MFG-E8/lactadherin/BA46 gene through interactions between the TA and DeltaN isoforms. (PubMed id 17637751) 1, 3 Okuyama T....Katoh I. (2008) Secretion of a peripheral membrane protein, MFG-E8, as a complex with membrane vesicles. (PubMed id 11856354) 1, 3 Oshima K....Matsuda T. (2002)
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Genome Databases showing MFGE8
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MFGE8
(According to HUGE )
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Specialized Databases showing MFGE8 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for MFGE8 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MFGE8:
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