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Aliases for METTL4 Gene

Aliases for METTL4 Gene

  • Methyltransferase Like 4 2 3
  • Methyltransferase-Like Protein 4 3
  • EC 2.1.1.- 4
  • HsT661 3

External Ids for METTL4 Gene

Summaries for METTL4 Gene

GeneCards Summary for METTL4 Gene

METTL4 (Methyltransferase Like 4) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and methyltransferase activity.

UniProtKB/Swiss-Prot for METTL4 Gene

  • Probable methyltransferase.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for METTL4 Gene

Genomics for METTL4 Gene

Genomic Location for METTL4 Gene

Start:
2,537,525 bp from pter
End:
2,571,509 bp from pter
Size:
33,985 bases
Orientation:
Minus strand

Genomic View for METTL4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for METTL4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for METTL4 Gene

Regulatory Elements for METTL4 Gene

Proteins for METTL4 Gene

  • Protein details for METTL4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N3J2-METL4_HUMAN
    Recommended name:
    Methyltransferase-like protein 4
    Protein Accession:
    Q8N3J2
    Secondary Accessions:
    • B2RNA1
    • Q2TAA7
    • Q9H5U9

    Protein attributes for METTL4 Gene

    Size:
    472 amino acids
    Molecular mass:
    54041 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB15520.1; Type=Frameshift; Positions=343; Evidence={ECO:0000305};

neXtProt entry for METTL4 Gene

Proteomics data for METTL4 Gene at MOPED

Post-translational modifications for METTL4 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for METTL4 Gene

No data available for DME Specific Peptides for METTL4 Gene

Domains for METTL4 Gene

Suggested Antigen Peptide Sequences for METTL4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N3J2

UniProtKB/Swiss-Prot:

METL4_HUMAN
Family:
  • Belongs to the MT-A70-like family.:
    • Q8N3J2
genes like me logo Genes that share domains with METTL4: view

No data available for Gene Families for METTL4 Gene

Function for METTL4 Gene

Molecular function for METTL4 Gene

UniProtKB/Swiss-Prot Function: Probable methyltransferase.

Enzyme Numbers (IUBMB) for METTL4 Gene

Gene Ontology (GO) - Molecular Function for METTL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0008168 methyltransferase activity IEA --
genes like me logo Genes that share ontologies with METTL4: view

miRNA for METTL4 Gene

miRTarBase miRNAs that target METTL4

No data available for Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for METTL4 Gene

Localization for METTL4 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for METTL4 Gene COMPARTMENTS Subcellular localization image for METTL4 gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for METTL4 Gene

Pathways for METTL4 Gene

SuperPathways for METTL4 Gene

No Data Available

Interacting Proteins for METTL4 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000458290%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000458290 for METTL4 Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for METTL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006139 nucleobase-containing compound metabolic process IEA --
GO:0032259 methylation IEA --
genes like me logo Genes that share ontologies with METTL4: view

No data available for Pathways by source for METTL4 Gene

Transcripts for METTL4 Gene

Unigene Clusters for METTL4 Gene

Methyltransferase like 4:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for METTL4 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b
SP1:
SP2: - - -
SP3: - -
SP4: -
SP5:

Relevant External Links for METTL4 Gene

GeneLoc Exon Structure for
METTL4
ECgene alternative splicing isoforms for
METTL4

Expression for METTL4 Gene

mRNA expression in normal human tissues for METTL4 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for METTL4 Gene

SOURCE GeneReport for Unigene cluster for METTL4 Gene Hs.126888

genes like me logo Genes that share expressions with METTL4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for METTL4 Gene

Orthologs for METTL4 Gene

This gene was present in the common ancestor of animals.

Orthologs for METTL4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia METTL4 35
  • 99.29 (n)
  • 99.15 (a)
METTL4 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia METTL4 35
  • 86.99 (n)
  • 82.73 (a)
METTL4 36
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia METTL4 35
  • 88.96 (n)
  • 82.59 (a)
METTL4 36
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mettl4 35
  • 80.78 (n)
  • 75.53 (a)
Mettl4 16
Mettl4 36
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia METTL4 36
  • 64 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia METTL4 36
  • 62 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mettl4 35
  • 80.64 (n)
  • 75.32 (a)
chicken
(Gallus gallus)
Aves METTL4 35
  • 67.62 (n)
  • 58.99 (a)
METTL4 36
  • 57 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia METTL4 36
  • 52 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.19454 35
tropical clawed frog
(Silurana tropicalis)
Amphibia mettl4 35
  • 61.3 (n)
  • 55.77 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC560686 35
  • 55.62 (n)
  • 51.18 (a)
METTL4 36
  • 42 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008665 35
  • 47.33 (n)
  • 41.04 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG14906 35
  • 47.81 (n)
  • 38.89 (a)
CG14906 36
  • 27 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea C18A3.1 36
  • 28 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 46 (a)
OneToOne
Species with no ortholog for METTL4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for METTL4 Gene

ENSEMBL:
Gene Tree for METTL4 (if available)
TreeFam:
Gene Tree for METTL4 (if available)

Paralogs for METTL4 Gene

No data available for Paralogs for METTL4 Gene

Variants for METTL4 Gene

Sequence variations from dbSNP and Humsavar for METTL4 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type MAF
rs1047363 -- 2,537,590(-) ATGGA(A/G)CTATT utr-variant-3-prime
rs1110370 -- 2,566,699(-) AAAAG(A/G)CTTTA intron-variant
rs1110408 -- 2,566,020(+) ccagc(C/T)tgggt intron-variant
rs1878552 -- 2,566,496(+) AATGC(C/T)TAATC intron-variant
rs1969312 -- 2,542,917(-) CTCCT(G/T)ACCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for METTL4 Gene

Variant ID Type Subtype PubMed ID
nsv909314 CNV Gain 21882294
nsv132209 CNV Loss 16902084

Relevant External Links for METTL4 Gene

HapMap Linkage Disequilibrium report
METTL4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for METTL4 Gene

Disorders for METTL4 Gene

Relevant External Links for METTL4

Genetic Association Database (GAD)
METTL4
genes like me logo Genes that share disorders with METTL4: view

No data available for UniProtKB/Swiss-Prot for METTL4 Gene

Publications for METTL4 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3
  5. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3

Products for METTL4 Gene

Sources for METTL4 Gene

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