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Aliases for METTL26 Gene

Aliases for METTL26 Gene

  • Methyltransferase Like 26 2 3 5
  • C16orf13 3 4
  • Chromosome 16 Open Reading Frame 13 2
  • Methyltransferase-Like 26 3
  • UPF0585 Protein C16orf13 3
  • JFP2 3

External Ids for METTL26 Gene

Previous HGNC Symbols for METTL26 Gene

  • C16orf13

Summaries for METTL26 Gene

GeneCards Summary for METTL26 Gene

METTL26 (Methyltransferase Like 26) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for METTL26 Gene

Genomics for METTL26 Gene

Regulatory Elements for METTL26 Gene

Enhancers for METTL26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G000635 1.4 ENCODE dbSUPER 38.4 -0.7 -707 4.1 CREB3L1 AGO1 DMAP1 YY1 SLC30A9 ZNF143 SP3 SSRP1 ZNF610 GLIS1 METTL26 ENSG00000261505 WFIKKN1 JMJD8 ENSG00000260051 ENSG00000260954 RHOT2 WASH4P CAPN15 LOC105371038
GH16G000666 1.1 ENCODE 43.1 -31.9 -31911 3.0 HDGF PKNOX1 MLX ARNT CREB3L1 AGO1 ARID4B SIN3A DMAP1 YY1 METTL26 LOC105371038 WFIKKN1 RHBDL1 ENSG00000261505 ENSG00000262528 ENSG00000260051 RHOT2 ENSG00000260954 WASH4P
GH16G000659 1.5 Ensembl ENCODE dbSUPER 25.3 -24.6 -24590 2.7 HDGF AGO1 SIN3A ZNF2 GLIS2 ZNF143 FOS ZNF263 SP3 YY2 METTL26 WFIKKN1 RHBDL1 ENSG00000262528 RHOT2
GH16G000611 1.5 Ensembl ENCODE dbSUPER 13.3 +25.2 25190 0.8 HDGF ARID4B SIN3A DMAP1 ZNF2 GLIS2 ZNF143 SP3 REST ZNF592 WFIKKN1 LOC105371038 RAB40C ENSG00000261505 ENSG00000260051 METTL26 ENSG00000260954 RHOT2 NHLRC4 PIGQ
GH16G000620 1.5 Ensembl ENCODE dbSUPER 13.3 +14.3 14337 2.8 HDGF PKNOX1 ATF1 CREB3L1 SIN3A GLIS2 KDM4B DEK ZNF263 NCOA1 WFIKKN1 RAB40C METTL26 FBXL16 GC16M000614
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around METTL26 on UCSC Golden Path with GeneCards custom track

Promoters for METTL26 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000082218 -134 1801 CREB3L1 AGO1 DMAP1 YY1 SLC30A9 ZNF143 SP3 SSRP1 ZNF610 NBN

Genomic Location for METTL26 Gene

Chromosome:
16
Start:
634,427 bp from pter
End:
636,366 bp from pter
Size:
1,940 bases
Orientation:
Minus strand

Genomic View for METTL26 Gene

Genes around METTL26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
METTL26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for METTL26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for METTL26 Gene

Proteins for METTL26 Gene

  • Protein details for METTL26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96S19-CP013_HUMAN
    Recommended name:
    UPF0585 protein C16orf13
    Protein Accession:
    Q96S19
    Secondary Accessions:
    • A8MTR1
    • A8MWJ8
    • A8MZA1
    • B4DG95
    • B4DIJ3
    • D6REA6
    • F6TF62
    • F6VM53
    • Q96IW1
    • Q96MD6

    Protein attributes for METTL26 Gene

    Size:
    204 amino acids
    Molecular mass:
    22578 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK61238.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=EAW85785.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for METTL26 Gene

neXtProt entry for METTL26 Gene

Post-translational modifications for METTL26 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for METTL26 Gene

Domains & Families for METTL26 Gene

Gene Families for METTL26 Gene

Protein Domains for METTL26 Gene

Suggested Antigen Peptide Sequences for METTL26 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96S19

UniProtKB/Swiss-Prot:

CP013_HUMAN :
  • Belongs to the UPF0585 family.
Family:
  • Belongs to the UPF0585 family.
genes like me logo Genes that share domains with METTL26: view

Function for METTL26 Gene

genes like me logo Genes that share phenotypes with METTL26: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for METTL26 Gene

Localization for METTL26 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for METTL26 gene
Compartment Confidence
nucleus 3
extracellular 2
plasma membrane 1
mitochondrion 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for METTL26 Gene

Pathways & Interactions for METTL26 Gene

SuperPathways for METTL26 Gene

No Data Available

Interacting Proteins for METTL26 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000440765%0d%0a9606.ENSP00000267814%0d%0a
Selected Interacting proteins: Q96S19-CP013_HUMAN ENSP00000440765 for METTL26 Gene via IID STRING

Gene Ontology (GO) - Biological Process for METTL26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for METTL26 Gene

Transcripts for METTL26 Gene

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for METTL26 Gene

No ASD Table

Relevant External Links for METTL26 Gene

GeneLoc Exon Structure for
METTL26
ECgene alternative splicing isoforms for
METTL26

Expression for METTL26 Gene

NURSA nuclear receptor signaling pathways regulating expression of METTL26 Gene:

METTL26

Evidence on tissue expression from TISSUES for METTL26 Gene

  • Lung(3.3)
  • Nervous system(2.5)
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for METTL26 Gene

Orthologs for METTL26 Gene

This gene was present in the common ancestor of animals.

Orthologs for METTL26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C16orf13 35
  • 98 (a)
OneToOne
C16H16orf13 34
  • 97.88 (n)
dog
(Canis familiaris)
Mammalia C6H16orf13 34
  • 88.56 (n)
C16orf13 35
  • 50 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C25H16orf13 34
  • 87.42 (n)
C25H16ORF13 35
  • 61 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 0610011F06Rik 34 35
  • 85.71 (n)
Mettl26 16
rat
(Rattus norvegicus)
Mammalia RGD1307155 34
  • 84.92 (n)
oppossum
(Monodelphis domestica)
Mammalia C16orf13 35
  • 44 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C16orf13 35
  • 44 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c16orf13 34
  • 61.88 (n)
zebrafish
(Danio rerio)
Actinopterygii zgc:56719 34
  • 58.78 (n)
C3H16orf13 35
  • 34 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG18661 34 35
  • 51.68 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009967 34
  • 50.58 (n)
worm
(Caenorhabditis elegans)
Secernentea Y26E6A.3 34 35
  • 48 (n)
Species where no ortholog for METTL26 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for METTL26 Gene

ENSEMBL:
Gene Tree for METTL26 (if available)
TreeFam:
Gene Tree for METTL26 (if available)

Paralogs for METTL26 Gene

No data available for Paralogs for METTL26 Gene

Variants for METTL26 Gene

Sequence variations from dbSNP and Humsavar for METTL26 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000286847 -- 635,667(+) GGTCC(A/C)GCGAC intron-variant, nc-transcript-variant, upstream-variant-2KB, reference, missense
rs1000384641 -- 636,112(+) GCTGG(C/T)CCACG nc-transcript-variant, upstream-variant-2KB, reference, missense
rs1000651143 -- 636,841(+) AAGAG(A/G)CTGTG nc-transcript-variant, upstream-variant-2KB
rs1000725409 -- 635,136(+) CCCAG(C/G)GAGGG intron-variant, upstream-variant-2KB
rs1001470645 -- 636,730(+) AAAAA(A/G)CTAAG nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for METTL26 Gene

Variant ID Type Subtype PubMed ID
dgv334n27 CNV loss 19166990
dgv4823n54 CNV loss 21841781
dgv4824n54 CNV loss 21841781
esv2422427 CNV duplication 17116639
esv2750219 CNV deletion 23290073
nsv1160325 CNV duplication 26073780
nsv1160326 CNV duplication 26073780
nsv471063 CNV loss 18288195
nsv471065 CNV gain 18288195
nsv516590 CNV loss 19592680
nsv526903 CNV loss 19592680
nsv571012 CNV loss 21841781
nsv571015 CNV loss 21841781
nsv833114 CNV gain+loss 17160897
nsv952898 CNV deletion 24416366

Variation tolerance for METTL26 Gene

Gene Damage Index Score: 0.88; 18.30% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for METTL26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
METTL26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for METTL26 Gene

Disorders for METTL26 Gene

Relevant External Links for METTL26

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
METTL26
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
METTL26

No disorders were found for METTL26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for METTL26 Gene

Publications for METTL26 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 3 4 64
  3. Reversible oxidation of phosphatase and tensin homolog (PTEN) alters its interactions with signaling and regulatory proteins. (PMID: 26561776) Verrastro I. … Pitt A.R. (Free Radic. Biol. Med. 2016) 3 64
  4. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 3 64
  5. N-terminal acetylome analyses and functional insights of the N- terminal acetyltransferase NatB. (PMID: 22814378) Van Damme P. … Aldabe R. (Proc. Natl. Acad. Sci. U.S.A. 2012) 4 64

Products for METTL26 Gene

Sources for METTL26 Gene

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