Aliases for MESTP1 Gene
Aliases for MESTP1 Gene
External Ids for MESTP1 Gene
- HGNC: 29660
- Entrez Gene: 338470
- Ensembl: ENSG00000220884
Previous GeneCards Identifiers for MESTP1 Gene
- GC06M129291
- GC06M129293
- GC06M126830
Summaries for MESTP1 Gene
GeneCards Summary for MESTP1 Gene
MESTP1 (Mesoderm Specific Transcript Pseudogene 1) is a Pseudogene.
Additional gene information for MESTP1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MESTP1 Gene
Genomics for MESTP1 Gene
GeneHancer (GH) Regulatory Elements for MESTP1 Gene
Promoters and enhancers for MESTP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06I128929 | Enhancer | 0.3 | FANTOM5 | 550.8 | +0.5 | 522 | 0.5 | GC06M128928 MESTP1 LAMA2 | ||
| GH06I129133 | Enhancer | 0.8 | FANTOM5 Ensembl ENCODE | 0.1 | -204.0 | -203984 | 1.5 | CTCF NR2F2 | LAMA2 BMPR1APS1 MESTP1 | |
| GH06I129102 | Enhancer | 0.7 | Ensembl ENCODE | 0.1 | -174.0 | -174026 | 3.9 | POLR2A SCRT2 ZIC2 SP7 | BMPR1APS1 MESTP1 LAMA2 | |
| GH06I129029 | Enhancer | 0.4 | ENCODE | 0.1 | -101.3 | -101330 | 3.3 | ATF4 CEBPB FOXP2 | MESTP1 BMPR1APS1 LAMA2 | |
| GH06I129120 | Enhancer | 0.3 | ENCODE | 0.1 | -190.9 | -190913 | 1.1 | MZF1 | BMPR1APS1 MESTP1 LAMA2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around MESTP1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for MESTP1 Gene
Genomic Locations for MESTP1 Gene
- chr6:128,927,756-128,930,216
- (GRCh38/hg38)
- Size:
- 2,461 bases
- Orientation:
- Minus strand
- chr6:129,248,899-129,251,350
- (GRCh37/hg19)
Genomic View for MESTP1 Gene
Genes around MESTP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6q22.33 by Ensembl
- 6q22.33 by Entrez Gene
- 6q22.33 by HGNC
MESTP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MESTP1 Gene
Proteins for MESTP1 Gene
Post-translational modifications for MESTP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for MESTP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MESTP1
- Origene Custom Protein Services for MESTP1
- Search GeneTex for Proteins for MESTP1
No data available for DME Specific Peptides for MESTP1 Gene
Domains & Families for MESTP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MESTP1 Gene
Function for MESTP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for MESTP1
-
- Search ViGene Biosciences for MESTP1
CRISPR Products
- Browse CRISPR knockouts for MESTP1
- Applied Biological Materials CRISPR for MESTP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for MESTP1
Inhibitory RNA Products
- Search ViGene Biosciences for MESTP1
Clone Products
- GenScript: Custom all cDNA clones Services for MESTP1
- VectorBuilder custom plasmid, inducible vectors for MESTP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MESTP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MESTP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MESTP1 Gene
Localization for MESTP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MESTP1 Gene
Transcripts for MESTP1 Gene
mRNA/cDNA for MESTP1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for MESTP1
- Applied Biological Materials CRISPR for MESTP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for MESTP1
Inhibitory RNA Products
- Search ViGene Biosciences for MESTP1
Clone Products
- GenScript: Custom all cDNA clones Services for MESTP1
- VectorBuilder custom plasmid, inducible vectors for MESTP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MESTP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MESTP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for MESTP1 Gene
mRNA differential expression in normal tissues according to GTEx for MESTP1 Gene
This gene is overexpressed in Heart - Left Ventricle (x4.7) and Nerve - Tibial (x4.0).
NURSA nuclear receptor signaling pathways regulating expression of MESTP1 Gene:
MESTP1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MESTP1 Gene
Orthologs for MESTP1 Gene
No data available for Orthologs for MESTP1 Gene
Paralogs for MESTP1 Gene
No data available for Paralogs for MESTP1 Gene
Variants for MESTP1 Gene
Additional Variant Information for MESTP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MESTP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MESTP1 Gene
Disorders for MESTP1 Gene
Additional Disease Information for MESTP1
- Genetic Association Database
- (GAD)
No disorders were found for MESTP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MESTP1 Gene
Publications for MESTP1 Gene
- Genome-wide association study of height and body mass index in Australian twin families. (PMID: 20397748) Liu JZ … McRae AF (Twin research and human genetics : the official journal of the International Society for Twin Studies 2010) 44 58
Products for MESTP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MESTP1
- Origene Custom Protein Services for MESTP1
- Browse OriGene Inhibitory RNA Products For MESTP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MESTP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MESTP1
- GenScript: Custom all cDNA clones Services for MESTP1
- GenScript Custom Purified and Recombinant Proteins Services for MESTP1
- GenScript Custom Assay Services for MESTP1
- GenScript Custom overexpressing Cell Line Services for MESTP1
- Browse GenScript CRISPR for MESTP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for MESTP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for MESTP1
- VectorBuilder custom plasmid, inducible vectors for MESTP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MESTP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for MESTP1
- Search GeneTex for Proteins for MESTP1
Sources for MESTP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew