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MESTP1 Gene(Pseudogene)

Mesoderm Specific Transcript Pseudogene 1

GCID:
GC06M128927
GIFtS:
11
Genes Participants
UDN Logo

Aliases for MESTP1 Gene

Aliases for MESTP1 Gene

  • Mesoderm Specific Transcript Pseudogene 1 2 3 5
  • Mesoderm Specific Transcript Homolog (Mouse) Pseudogene 1 2

External Ids for MESTP1 Gene

Previous GeneCards Identifiers for MESTP1 Gene

  • GC06M129291
  • GC06M129293
  • GC06M126830

Summaries for MESTP1 Gene

GeneCards Summary for MESTP1 Gene

MESTP1 (Mesoderm Specific Transcript Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MESTP1 Gene

Genomics for MESTP1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for MESTP1 Gene

Enhancers for MESTP1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MESTP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MESTP1 Gene

Chromosome:
6
Start:
128,927,756 bp from pter
End:
128,930,216 bp from pter
Size:
2,461 bases
Orientation:
Minus strand

Genomic View for MESTP1 Gene

Genes around MESTP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MESTP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MESTP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MESTP1 Gene

Proteins for MESTP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MESTP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MESTP1 Gene

Domains & Families for MESTP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MESTP1 Gene

Function for MESTP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MESTP1 Gene

Localization for MESTP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MESTP1 Gene

Pathways & Interactions for MESTP1 Gene

SuperPathways for MESTP1 Gene

PathCards logoMore details on SuperPathways for MESTP1
No Data Available

Interacting Proteins for MESTP1 Gene

Gene Ontology (GO) - Biological Process for MESTP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MESTP1 Gene

Drugs & Compounds for MESTP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MESTP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for MESTP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MESTP1 Gene

No ASD Table

Relevant External Links for MESTP1 Gene

GeneLoc Exon Structure for
MESTP1
ECgene alternative splicing isoforms for
MESTP1

Expression for MESTP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for MESTP1 Gene

mRNA expression in normal human tissues for MESTP1 Gene
mRNA expression by GTEx for MESTP1 Gene

mRNA differential expression in normal tissues according to GTEx for MESTP1 Gene

This gene is overexpressed in Heart - Left Ventricle (x4.7) and Nerve - Tibial (x4.0).
genes like me logo Genes that share expression patterns with MESTP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MESTP1 Gene

Orthologs for MESTP1 Gene

Evolution for MESTP1 Gene

ENSEMBL:
Gene Tree for MESTP1 (if available)
TreeFam:
Gene Tree for MESTP1 (if available)

No data available for Orthologs for MESTP1 Gene

Paralogs for MESTP1 Gene

No data available for Paralogs for MESTP1 Gene

Variants for MESTP1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MESTP1 Gene

Disorders for MESTP1 Gene

Relevant External Links for MESTP1

Genetic Association Database (GAD)
MESTP1

No disorders were found for MESTP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MESTP1 Gene

Publications for MESTP1 Gene

  1. Genome-wide association study of height and body mass index in Australian twin families. (PMID: 20397748) Liu J.Z. … McRae A.F. (Twin Res Hum Genet 2010) 48 67

Products for MESTP1 Gene

Sources for MESTP1 Gene

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